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Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147186695 on build GRCh38
Cytoband
1q21.1
Assay ID Hs00338734_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 7 2063 NP_001138302.1
NM_001461.3 9 2196 NP_001452.2
XM_005272946.4 9 2170 XP_005273003.1
XM_005272947.4 9 1914 XP_005273004.1
XM_005272948.4 9 1897 XP_005273005.1
XM_006711245.3 8 1833 XP_006711308.1
XM_011509350.2 9 2201 XP_011507652.1
XM_011509351.2 8 1933 XP_011507653.1
XM_017000801.1 8 1945 XP_016856290.1
XM_017000802.1 8 1715 XP_016856291.1
AK222728.1 9 1911 BAD96448.1
AK225739.1
BC035687.1 7 1736 AAH35687.1
L37080.1 9 1882 AAA67849.1
Z47553.1 9 1888 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain LOC100996517 LOC100505824 RNVU1-3 HYDIN2 PDE4DIP LOC101927468 LOC105371226 RNVU1-6 MIR5087 PDIA3P1 NUDT4P1 ACP6 GPR89B GJA5 RNU1-13P RNVU1-1 FMO5 NBPF11 PDZK1P1 NBPF13P CHD1L LOC284561 PPIAL4G NBPF14 LINC01138 LOC101928979 RNVU1-8 LOC728989 NUDT4P2 LOC105371242 RNVU1-7 GJA8 LOC100132057 NOTCH2NL LINC00624 PRKAB2 NBPF10 LOC100996763 BCL9 CH17-408M7.1 NBPF12 MIR6077
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss LOC100505824 HYDIN2 PDE4DIP LOC101927468 RNVU1-6 NUDT4P1 ACP6 NUDT17 GPR89B TXNIP RNU1-13P RNVU1-1 ITGA10 NBPF11 PDZK1P1 NBPF13P CHD1L PPIAL4G LINC01138 ANKRD35 LOC101928979 RNF115 POLR3GL LOC105371242 GNRHR2 RNVU1-7 GJA8 PEX11B LINC00624 NBPF12 RBM8A LOC100996517 RNVU1-3 PDZK1 LOC105371226 MIR5087 PDIA3P1 ANKRD34A PIAS3 GJA5 CD160 LIX1L FMO5 LOC284561 NBPF14 RNVU1-8 LOC728989 NUDT4P2 MIR6736 LOC100132057 NOTCH2NL PRKAB2 NBPF10 POLR3C LOC100996763 BCL9 CH17-408M7.1 HFE2 MIR6077 GPR89A
nsv1121713 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion FMO5 RNVU1-8 LOC728989 PDIA3P1 PRKAB2 NBPF13P CHD1L
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss LOC100996517 LOC100505824 RNVU1-3 HYDIN2 PDE4DIP LOC101927468 LOC105371226 MIR5087 PDIA3P1 NUDT4P1 ACP6 GPR89B GJA5 RNU1-13P RNVU1-1 FMO5 NBPF11 PDZK1P1 NBPF13P CHD1L LOC284561 PPIAL4G NBPF14 LINC01138 RNVU1-8 LOC728989 NUDT4P2 LOC105371242 RNVU1-7 GJA8 LOC100132057 NOTCH2NL LINC00624 PRKAB2 NBPF10 LOC100996763 BCL9 CH17-408M7.1 NBPF12 MIR6077
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion LOC100996517 LOC100505824 RNVU1-3 HYDIN2 PDE4DIP LOC101927468 LOC105371226 RNVU1-6 MIR5087 PDIA3P1 NUDT4P1 ACP6 GPR89B ANKRD34A GJA5 TXNIP RNU1-13P RNVU1-1 LIX1L FMO5 NBPF11 PDZK1P1 NBPF13P CHD1L LOC284561 PPIAL4G NBPF14 LINC01138 LOC101928979 POLR3GL RNVU1-8 LOC728989 NUDT4P2 LOC105371242 RNVU1-7 GJA8 LOC100132057 NOTCH2NL LINC00624 PRKAB2 NBPF10 LOC100996763 BCL9 CH17-408M7.1 NBPF12 HFE2 MIR6077
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication LOC100996517 LOC100505824 RNVU1-3 HYDIN2 PDE4DIP LOC101927468 LOC105371226 MIR5087 PDIA3P1 NUDT4P1 ACP6 GPR89B GJA5 RNU1-13P RNVU1-1 FMO5 NBPF11 PDZK1P1 NBPF13P CHD1L LOC284561 PPIAL4G NBPF14 LINC01138 RNVU1-8 LOC728989 NUDT4P2 LOC105371242 RNVU1-7 GJA8 LOC100132057 NOTCH2NL LINC00624 PRKAB2 LOC100996763 BCL9 CH17-408M7.1 NBPF12 MIR6077
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain LOC100996517 LOC100505824 RNVU1-3 HYDIN2 PDE4DIP LOC101927468 LOC105371226 RNVU1-6 MIR5087 PDIA3P1 NUDT4P1 ACP6 GPR89B GJA5 RNU1-13P RNVU1-1 FMO5 NBPF11 PDZK1P1 NBPF13P CHD1L LOC284561 PPIAL4G NBPF14 LINC01138 LOC101928979 RNVU1-8 LOC728989 NUDT4P2 LOC105371242 RNVU1-7 GJA8 LOC100132057 NOTCH2NL LINC00624 PRKAB2 NBPF10 LOC100996763 BCL9 CH17-408M7.1 NBPF12 MIR6077
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion LOC100996517 LOC100505824 RNVU1-3 HYDIN2 PDE4DIP LOC101927468 LOC105371226 MIR5087 PDIA3P1 NUDT4P1 ACP6 GPR89B GJA5 RNU1-13P RNVU1-1 FMO5 NBPF11 PDZK1P1 NBPF13P CHD1L LOC284561 PPIAL4G NBPF14 LINC01138 LOC101928979 RNVU1-8 LOC728989 NUDT4P2 NBPF9 LOC105371242 RNVU1-7 GJA8 LOC100132057 NOTCH2NL LINC00624 PRKAB2 NBPF10 LOC100996763 BCL9 CH17-408M7.1 NBPF12 MIR6077
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss FMO5 PDIA3P1 PRKAB2 CHD1L

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