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Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147186528 on build GRCh38
Cytoband
1q21.1
Assay ID Hs00347842_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 7 2230 NP_001138302.1
NM_001461.3 9 2363 NP_001452.2
XM_005272946.4 9 2337 XP_005273003.1
XM_005272947.4 9 2081 XP_005273004.1
XM_005272948.4 9 2064 XP_005273005.1
XM_006711245.3 8 2000 XP_006711308.1
XM_011509350.2 9 2368 XP_011507652.1
XM_011509351.2 8 2100 XP_011507653.1
XM_017000801.1 8 2112 XP_016856290.1
XM_017000802.1 8 1882 XP_016856291.1
AK222728.1 9 2078 BAD96448.1
AK225739.1
BC035687.1 7 1903 AAH35687.1
L37080.1 9 2049 AAA67849.1
Z47553.1 9 2055 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain MIR6077 PDE4DIP GJA8 LOC100505824 NBPF13P RNVU1-6 LOC284561 NBPF10 PPIAL4G MIR5087 LOC728989 LOC100132057 LOC101927468 NUDT4P2 RNVU1-7 CHD1L PRKAB2 NOTCH2NL GPR89B LOC100996763 RNVU1-1 ACP6 LOC105371242 LOC100996517 FMO5 BCL9 HYDIN2 NBPF11 RNU1-13P NBPF12 LOC101928979 GJA5 CH17-408M7.1 NBPF14 RNVU1-3 LINC00624 NUDT4P1 RNVU1-8 PDZK1P1 PDIA3P1 LOC105371226 LINC01138
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss MIR6077 PDE4DIP GJA8 LOC100505824 RNVU1-6 LOC284561 RBM8A MIR6736 GNRHR2 PDZK1 LOC101927468 RNVU1-7 ITGA10 POLR3C PRKAB2 GPR89B LOC100996763 RNVU1-1 ACP6 POLR3GL LOC105371242 LOC100996517 BCL9 HYDIN2 TXNIP RNU1-13P NBPF12 LOC101928979 NBPF14 NUDT4P1 LIX1L HFE2 RNVU1-8 PDZK1P1 PDIA3P1 NBPF13P ANKRD34A NBPF10 PPIAL4G MIR5087 LOC728989 GPR89A LOC100132057 NUDT4P2 ANKRD35 CHD1L PEX11B NOTCH2NL NUDT17 CD160 FMO5 NBPF11 PIAS3 GJA5 CH17-408M7.1 RNF115 RNVU1-3 LINC00624 LOC105371226 LINC01138
nsv1121713 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion LOC728989 NBPF13P CHD1L FMO5 RNVU1-8 PRKAB2 PDIA3P1
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss MIR6077 PDE4DIP GJA8 LOC100505824 NBPF13P LOC284561 NBPF10 PPIAL4G MIR5087 LOC728989 LOC100132057 LOC101927468 NUDT4P2 RNVU1-7 CHD1L PRKAB2 NOTCH2NL GPR89B LOC100996763 RNVU1-1 ACP6 LOC105371242 LOC100996517 FMO5 BCL9 HYDIN2 NBPF11 RNU1-13P NBPF12 GJA5 CH17-408M7.1 NBPF14 RNVU1-3 LINC00624 NUDT4P1 RNVU1-8 PDZK1P1 PDIA3P1 LOC105371226 LINC01138
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion MIR6077 PDE4DIP GJA8 LOC100505824 NBPF13P RNVU1-6 ANKRD34A LOC284561 NBPF10 PPIAL4G MIR5087 LOC728989 LOC100132057 LOC101927468 NUDT4P2 RNVU1-7 CHD1L PRKAB2 NOTCH2NL GPR89B LOC100996763 RNVU1-1 ACP6 POLR3GL LOC105371242 LOC100996517 FMO5 BCL9 HYDIN2 TXNIP NBPF11 RNU1-13P NBPF12 LOC101928979 GJA5 CH17-408M7.1 NBPF14 RNVU1-3 LINC00624 NUDT4P1 LIX1L HFE2 RNVU1-8 PDZK1P1 PDIA3P1 LOC105371226 LINC01138
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication MIR6077 PDE4DIP GJA8 LOC100505824 NBPF13P LOC284561 PPIAL4G MIR5087 LOC728989 LOC100132057 LOC101927468 NUDT4P2 RNVU1-7 CHD1L PRKAB2 NOTCH2NL GPR89B LOC100996763 RNVU1-1 ACP6 LOC105371242 LOC100996517 FMO5 BCL9 HYDIN2 NBPF11 RNU1-13P NBPF12 GJA5 CH17-408M7.1 NBPF14 RNVU1-3 LINC00624 NUDT4P1 RNVU1-8 PDZK1P1 PDIA3P1 LOC105371226 LINC01138
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain MIR6077 PDE4DIP GJA8 LOC100505824 NBPF13P RNVU1-6 LOC284561 NBPF10 PPIAL4G MIR5087 LOC728989 LOC100132057 LOC101927468 NUDT4P2 RNVU1-7 CHD1L PRKAB2 NOTCH2NL GPR89B LOC100996763 RNVU1-1 ACP6 LOC105371242 LOC100996517 FMO5 BCL9 HYDIN2 NBPF11 RNU1-13P NBPF12 LOC101928979 GJA5 CH17-408M7.1 NBPF14 RNVU1-3 LINC00624 NUDT4P1 RNVU1-8 PDZK1P1 PDIA3P1 LOC105371226 LINC01138
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion MIR6077 PDE4DIP GJA8 LOC100505824 NBPF13P LOC284561 NBPF10 PPIAL4G NBPF9 MIR5087 LOC728989 LOC100132057 LOC101927468 NUDT4P2 RNVU1-7 CHD1L PRKAB2 NOTCH2NL GPR89B LOC100996763 RNVU1-1 ACP6 LOC105371242 LOC100996517 FMO5 BCL9 HYDIN2 NBPF11 RNU1-13P NBPF12 LOC101928979 GJA5 CH17-408M7.1 NBPF14 RNVU1-3 LINC00624 NUDT4P1 RNVU1-8 PDZK1P1 PDIA3P1 LOC105371226 LINC01138
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss CHD1L FMO5 PRKAB2 PDIA3P1

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