Genomic Map
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Target Gene Details
Entrez Gene ID: | 284415 |
Gene Name: | V-set and transmembrane domain containing 1 |
Gene Aliases: |
SIRL-1, SIRL1, UNQ3033 |
Location: |
Chr.19:54040825-54063966 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| VSTM1 | NM_001288791.1 | NP_001275720.1 | ||
| NM_001288792.1 | NP_001275721.1 | |||
| NM_001288793.1 | NP_001275722.1 | |||
| NM_198481.3 | NP_940883.2 | |||
| NR_110142.1 | ||||
| XM_011526845.1 | 1 | 75 | XP_011525147.1 | |
| XM_011526846.1 | 1 | 75 | XP_011525148.1 | |
| XM_011526847.1 | 1 | 75 | XP_011525149.1 | |
| XM_011526848.1 | 1 | 75 | XP_011525150.1 | |
| XM_011526849.1 | 1 | 75 | XP_011525151.1 | |
| XM_017026666.1 | 1 | 75 | XP_016882155.1 | |
| AY358542.1 | AAQ88906.1 | |||
| BC100943.2 | AAI00944.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion |
 NDUFA3
TARM1
PRPF31
VSTM1
TFPT
OSCAR
|
| nsv580110 | Chr.19:53961144 - 54093354 on Build GRCh38 | Gain |
CACNG8
TARM1
MIR935
CACNG6
VSTM1
|
| nsv2542 | Chr.19:54050737 - 54097924 on Build GRCh38 | Deletion |
TARM1
VSTM1
OSCAR
|
| nsv1063127 | Chr.19:53926876 - 54068977 on Build GRCh38 | Gain |
CACNG7
CACNG8
MIR935
CACNG6
VSTM1
|
| esv3644780 | Chr.19:54057724 - 54066399 on Build GRCh38 | Gain |
VSTM1
|
| esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion |
CACNG7
MIR518C
MIR373
ZNF331
RPS9
MIR517B
LENG1
MIR518F
MIR519B
TMC4
DPRX
MIR522
TPM3P9
TFPT
MIR526A2
MIR524
OSCAR
MIR517A
MIR512-2
LILRB3
MIR518B
MIR519A1
ZNF665
BIRC8
MIR1323
MBOAT7
MIR520A
MIR520C
MIR518E
FAM90A27P
VSTM1
MIR527
ZNF761
MIR526B
ZNF525
NDUFA3
LILRA5
MIR519D
ZNF765
MIR520H
MIR516A1
MIR515-1
MIR526A1
MIR525
VN1R2
MIR498
ZNF813
MIR1283-1
MYADM
ZNF818P
VN1R4
MIR935
MIR520F
MIR512-1
MIR371A
MIR520B
PRKCG
MIR517C
MIR516A2
MIR371B
MIR521-1
MIR518A2
NLRP12
MIR523
MIR521-2
TSEN34
ZNF677
CACNG6
MIR372
MIR4752
MIR520G
LILRB5
MIR519E
MIR518D
MIR519C
LOC284379
MIR1283-2
MIR516B2
MIR515-2
MIR520E
LOC105372457
MIR518A1
CACNG8
TARM1
PRPF31
LILRB2
MIR516B1
CNOT3
MIR519A2
LILRA6
MIR520D
ZNF845
|
| nsv833877 | Chr.19:53951529 - 54117323 on Build GRCh38 | Loss |
CACNG8
NDUFA3
TARM1
PRPF31
MIR935
CACNG6
VSTM1
TFPT
OSCAR
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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