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Gene Symbol
MIB2
Assay Reference Genome
Location

Chr.1:1616641 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00463645_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 142678

Gene Name:

 mindbomb E3 ubiquitin protein ligase 2

Gene Aliases:

 ZZANK1, ZZZ5

Location:

 Chr.1:1615188-1630610 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 2 - Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MIB2 NM_001170686.1 NP_001164157.1
NM_001170687.1 NP_001164158.1
NM_001170688.1 NP_001164159.1
NM_001170689.1 NP_001164160.1
NM_080875.2 NP_543151.2
NR_033183.1
XM_006710372.1 XP_006710435.1
XM_011540731.2 XP_011539033.1
XM_011540736.2 XP_011539038.1
XM_011540737.2 XP_011539039.1
XM_011540741.2 XP_011539043.1
XM_011540742.2 XP_011539044.1
XM_017000349.1 XP_016855838.1
XM_017000350.1 XP_016855839.1
XM_017000351.1 XP_016855840.1
XM_017000352.1 XP_016855841.1
XM_017000353.1 XP_016855842.1
XM_017000354.1 XP_016855843.1
XM_017000355.1 XP_016855844.1
XM_017000356.1 XP_016855845.1
XM_017000357.1 XP_016855846.1
XM_017000358.1 XP_016855847.1
XM_017000359.1 XP_016855848.1
XM_017000360.1 XP_016855849.1
XM_017000361.1 XP_016855850.1
XM_017000362.1 XP_016855851.1
XM_017000363.1 XP_016855852.1
XM_017000364.1 XP_016855853.1
XM_017000365.1 XP_016855854.1
XM_017000366.1 XP_016855855.1
AB074480.1 BAB92950.1
AB076691.1 BAC00992.1
AB076692.1 BAC00993.1
AB076693.1 BAC00994.1
AB097000.1 BAC77353.1
AK098785.1 BAC05413.1
AK122751.1
AK122863.1
AK123400.1 2 252
AK128167.1
AK128553.1
AK293642.1
AK302757.1
AK309362.1
BC016490.1 AAH16490.1
BC037542.1 AAH37542.1
DA391220.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv5n111 Chr.1:1575421 - 1823403 on Build GRCh38 Deletion GNB1 FNDC10 SLC35E2 NADK CDK11B MMP23B MMP23A MIB2 CDK11A SLC35E2B
dgv8n100 Chr.1:1569349 - 1741152 on Build GRCh38 Loss FNDC10 SLC35E2 CDK11B MMP23B MMP23A SSU72 MIB2 CDK11A SLC35E2B
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC107985729 MIR6726 LOC107985728 SLC35E2 MIR6727 SDF4 ATAD3B PUSL1 MIR200B SSU72 HES4 CDK11B KLHL17 MMP23B MMP23A AGRN LINC01342 AURKAIP1 MIR429 RNF223 ATAD3C MXRA8 LOC102724312 LOC105378948 FAM41C LOC100287934 LINC00115 SLC35E2B DVL1 MIR200A TTLL10-AS1 MIB2 ATAD3A CPSF3L SAMD11 CCNL2 FAM132A PLEKHN1 VWA1 MIR6808 CPTP LOC100288069 C1orf159 UBE2J2 LINC01128 SCNN1D ISG15 TNFRSF4 TNFRSF18 TTLL10 LOC148413 TMEM240 ACAP3 LOC284600 FNDC10 TMEM88B NADK FAM87B LOC100130417 PERM1 LOC100288175 MRPL20 NOC2L TAS1R3 ANKRD65 B3GALT6 CDK11A
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC107985728 MIR6727 ATAD3B PUSL1 PRKCZ MIR200B MIR6859-1 HES4 CDK11B MMP23B AGRN LINC01342 SKI MIR429 LOC105378949 MXRA8 LOC105378591 LOC102724312 LOC105378948 LOC100134822 LOC100132287 LOC100287934 LINC00115 SLC35E2B MIB2 ATAD3A CPSF3L LOC105378589 CCNL2 MIR6723 MIR1302-2 FAM132A LOC105378592 PLEKHN1 LOC100288069 SCNN1D ISG15 TNFRSF4 WASH7P TTLL10 TMEM52 FAAP20 LOC102725121 LOC101928626 ACAP3 LOC284600 TMEM88B MIR6859-2 NADK FAM87B LOC100130417 LOC100288175 ANKRD65 B3GALT6 LOC107985729 MIR6726 SLC35E2 SDF4 SSU72 LOC100129534 FAM138A KLHL17 MMP23A AURKAIP1 RNF223 ATAD3C MTND2P28 LOC107984841 FAM41C LOC105378947 LOC100506504 DVL1 MORN1 MIR200A CALML6 TTLL10-AS1 DDX11L1 LOC729737 GNB1 SAMD11 GABRD OR4F5 VWA1 MIR6808 CPTP C1orf159 UBE2J2 LINC01128 MTND1P23 OR4F16 OR4F29 TNFRSF18 LOC100133331 LOC148413 TMEM240 FNDC10 CFAP74 PERM1 MRPL20 NOC2L TAS1R3 CDK11A
nsv1160797 Chr.1:1566216 - 1805918 on Build GRCh38 Duplication GNB1 FNDC10 SLC35E2 NADK CDK11B MMP23B MMP23A SSU72 MIB2 CDK11A SLC35E2B
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion LOC107985729 MIR6726 CPSF3L MIR6727 SDF4 ATAD3B PUSL1 MIR200B CCNL2 SSU72 FAM132A VWA1 CDK11B MIR6808 MMP23B CPTP LINC01342 C1orf159 UBE2J2 SCNN1D AURKAIP1 TNFRSF4 MIR429 TNFRSF18 TTLL10 ATAD3C MXRA8 LOC148413 LOC102724312 TMEM240 ACAP3 FNDC10 TMEM88B DVL1 MIR200A TTLL10-AS1 MIB2 MRPL20 ATAD3A TAS1R3 ANKRD65 B3GALT6
esv2760410 Chr.1:1565561 - 1756248 on Build GRCh38 Gain+Loss FNDC10 SLC35E2 NADK CDK11B MMP23B MMP23A SSU72 MIB2 CDK11A SLC35E2B
nsv545017 Chr.1:1615322 - 1663759 on Build GRCh38 Loss CDK11B MMP23B MIB2 SLC35E2B
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss GNB1 LOC107985729 SLC35E2 ATAD3B GABRD LOC105378589 PRKCZ CCNL2 SSU72 VWA1 CDK11B MMP23B MMP23A LOC105378949 ATAD3C LOC105378591 TMEM52 LOC148413 LOC102724312 SLC35E2B TMEM240 FNDC10 TMEM88B NADK CFAP74 CALML6 MIB2 MRPL20 ATAD3A ANKRD65 CDK11A

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More Information


Additional Information:

For this assay, SNP(s) [rs149275584] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s) Process(es)


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