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See other ESRRA CNV Assays ›
Gene Symbol
ESRRA
Assay Reference Genome
Location

Chr.11:64315276 on build GRCh38
Cytoband
11q13.1
Assay ID Hs00565550_cn
Size
Availability Made To Order
Catalog # 4400291
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

2101

Gene Name:

estrogen related receptor alpha

Gene Aliases:

ERR1, ERRa, ERRalpha, ESRL1, NR3B1

Location:

Chr.11:64305528-64316743 on Build GRCh38

Assay Gene Location:

Overlaps Exon 7 - Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ESRRA NM_001282450.1 NP_001269379.1
NM_001282451.1 NP_001269380.1
NM_004451.4 NP_004442.3
XM_017017313.1 XP_016872802.1
BC007915.2 AAH07915.2
BC033701.1 AAH33701.1
BC063795.1
BC073956.1 AAH73956.1
BC092470.1 AAH92470.1
BC093720.1 AAH93720.1
BC093722.1 AAH93722.1
HQ692867.1
L38487.1 AAB17015.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv951010 Chr.11:63942829 - 64352128 on Build GRCh38 Deletion GPR137 PLCB3 KCNK4-TEX40 COX8A TRPT1 FERMT3 DNAJC4 NAA40 BAD NUDT22 MACROD1 PRDX5 STIP1 PPP1R14B CCDC88B ESRRA OTUB1 KCNK4 TRMT112 MIR7155 FKBP2 LOC105369340 VEGFB TEX40 FLRT1
dgv1963n54 Chr.11:64174262 - 64329761 on Build GRCh38 Loss GPR137 PLCB3 PRDX5 KCNK4-TEX40 STIP1 TRPT1 PPP1R14B FERMT3 ESRRA DNAJC4 KCNK4 TRMT112 FKBP2 BAD LOC105369340 VEGFB TEX40 NUDT22
nsv832186 Chr.11:64204788 - 64402587 on Build GRCh38 Loss MIR1237 GPR137 PLCB3 PRDX5 RPS6KA4 KCNK4-TEX40 TRPT1 PPP1R14B FERMT3 CCDC88B ESRRA DNAJC4 KCNK4 TRMT112 MIR7155 FKBP2 BAD LOC105369340 VEGFB TEX40 NUDT22
nsv469961 Chr.11:64055468 - 64318495 on Build GRCh38 Loss GPR137 PLCB3 MACROD1 PRDX5 KCNK4-TEX40 STIP1 TRPT1 PPP1R14B FERMT3 ESRRA DNAJC4 KCNK4 TRMT112 FKBP2 BAD LOC105369340 VEGFB TEX40 NUDT22 FLRT1

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More Information


Set Membership:

Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of transcription from RNA polymerase II promoter
regulation of transcription, DNA-templated
transcription initiation from RNA polymerase II promoter
mitochondrion organization
intracellular receptor signaling pathway
response to estradiol
regulation of cell proliferation
steroid hormone mediated signaling pathway
regulation of osteoblast differentiation
regulation of osteoclast differentiation
positive regulation of transcription from RNA polymerase II promoter
cartilage development
positive regulation of cellular response to insulin stimulus
RNA polymerase II core promoter proximal region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
steroid hormone receptor activity
RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
steroid binding
protein binding
zinc ion binding
protein domain specific binding
sequence-specific DNA binding

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