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Gene Symbol
SAMD11
Assay Reference Genome
Location

Chr.1:935790 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00583564_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
Your Price
Online offer:
4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 148398

Gene Name:

 sterile alpha motif domain containing 11

Gene Aliases:

 MRS

Location:

 Chr.1:925741-944581 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAMD11 NM_152486.2 NP_689699.2
BC024295.2 AAH24295.1
CN293867.1
CN342795.1
JX093066.1
JX093067.1
JX093068.1
JX093069.1
JX093070.1
JX093071.1
JX093072.1
JX093073.1
JX093074.1
JX093075.1
JX093076.1
JX093077.1
JX093078.1
JX093079.1
JX093080.1
JX093081.1
JX093082.1
JX093083.1
JX093084.1
JX093085.1
JX093086.1
JX093087.1
JX093088.1
JX093089.1
JX093090.1
JX093091.1
JX093092.1
JX093093.1
JX093094.1
JX093095.1
JX093096.1
JX093097.1
JX093098.1
JX093099.1
JX093100.1
JX093101.1
JX093102.1
JX093103.1
JX093104.1
JX093105.1
JX093106.1
JX093107.1
JX093108.1
JX093109.1
JX093110.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv15n54 Chr.1:934063 - 943937 on Build GRCh38 Loss SAMD11
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain LOC105378948 LOC100130417 RNF223 HES4 AGRN ISG15 LOC100288175 C1orf159 LOC107985728 NOC2L SAMD11 PLEKHN1 PERM1 KLHL17 LOC284600
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss ATAD3B MIR6727 LOC107985729 CALML6 LOC100133331 TAS1R3 LOC105378947 LOC105378591 LOC148413 LINC01128 MIR6859-1 LOC100506504 CFAP74 LOC105378949 GNB1 OR4F16 MORN1 LOC107984841 MIR200B GABRD LOC100129534 MIB2 PUSL1 MTND1P23 CPTP LOC102725121 LOC107985728 LOC100132287 TMEM88B NADK TMEM52 KLHL17 MMP23A MTND2P28 MMP23B HES4 SCNN1D ATAD3C VWA1 MRPL20 SSU72 LOC105378589 NOC2L MIR200A LINC01342 CDK11B DDX11L1 CCNL2 ATAD3A LOC105378948 TTLL10-AS1 LOC100130417 DVL1 ANKRD65 CDK11A SLC35E2 OR4F29 AGRN LOC100288175 TMEM240 SKI LOC284600 SLC35E2B MIR429 B3GALT6 AURKAIP1 CPSF3L MXRA8 WASH7P ISG15 SDF4 FAM132A FAAP20 TTLL10 FAM138A PLEKHN1 FAM41C MIR6723 RNF223 MIR6859-2 LINC00115 LOC100134822 LOC100288069 TNFRSF4 ACAP3 MIR6726 TNFRSF18 LOC105378592 FAM87B PERM1 UBE2J2 OR4F5 PRKCZ LOC729737 FNDC10 LOC101928626 MIR6808 LOC102724312 C1orf159 MIR1302-2 SAMD11 LOC100287934
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion LOC105378948 LOC100130417 RNF223 HES4 AGRN ISG15 LOC100288175 C1orf159 LOC107985728 NOC2L SAMD11 PLEKHN1 PERM1 KLHL17 LOC284600
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion LOC100130417 LOC107985728 NOC2L SAMD11 PLEKHN1 PERM1 KLHL17 LOC284600
dgv9n54 Chr.1:925754 - 952840 on Build GRCh38 Loss NOC2L SAMD11
nsv544932 Chr.1:934429 - 938178 on Build GRCh38 Loss SAMD11
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain LOC105378948 TTLL10-AS1 LOC100130417 RNF223 MIR200B AGRN LOC100288175 TNFRSF4 LOC107985728 TNFRSF18 PERM1 KLHL17 LOC284600 MIR429 HES4 ISG15 SDF4 TTLL10 C1orf159 NOC2L MIR200A LINC01342 SAMD11 PLEKHN1 FAM41C
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC105378948 TTLL10-AS1 LOC100130417 DVL1 ANKRD65 CDK11A SLC35E2 AGRN LOC100288175 ATAD3B TMEM240 MIR6727 LOC107985729 LOC284600 SLC35E2B TAS1R3 MIR429 B3GALT6 AURKAIP1 LOC148413 CPSF3L MXRA8 ISG15 SDF4 FAM132A LINC01128 TTLL10 PLEKHN1 FAM41C RNF223 LINC00115 LOC100288069 MIR200B MIB2 TNFRSF4 ACAP3 PUSL1 MIR6726 CPTP LOC107985728 TMEM88B TNFRSF18 NADK FAM87B PERM1 KLHL17 UBE2J2 MMP23A FNDC10 MMP23B HES4 SCNN1D ATAD3C MIR6808 VWA1 MRPL20 LOC102724312 SSU72 C1orf159 NOC2L MIR200A LINC01342 SAMD11 CDK11B CCNL2 ATAD3A LOC100287934
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain LOC105378948 MIR6723 LOC100130417 OR4F16 RNF223 LOC107984841 LINC00115 LOC100288069 AGRN LOC100288175 MTND1P23 LOC107985728 FAM87B PERM1 KLHL17 LOC284600 LOC100133331 MTND2P28 LOC105378947 LOC101928626 HES4 ISG15 LINC01128 C1orf159 NOC2L SAMD11 PLEKHN1 FAM41C LOC100287934
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss LOC105378948 TTLL10-AS1 LOC100130417 RNF223 LINC00115 MIR200B AGRN LOC100288175 TNFRSF4 LOC107985728 TNFRSF18 FAM87B PERM1 KLHL17 LOC284600 UBE2J2 MIR429 B3GALT6 HES4 ISG15 SDF4 FAM132A LINC01128 TTLL10 C1orf159 NOC2L MIR200A LINC01342 SAMD11 PLEKHN1 FAM41C
dgv1n111 Chr.1:690090 - 939522 on Build GRCh38 Duplication LOC100130417 OR4F16 LOC107984841 LINC00115 LOC100288069 LINC01128 LOC107985728 SAMD11 FAM87B LOC284600 FAM41C LOC100133331 LOC100287934
dgv3n111 Chr.1:783283 - 939522 on Build GRCh38 Duplication LINC01128 LOC100130417 LOC107985728 SAMD11 FAM87B LINC00115 LOC284600 FAM41C LOC100287934
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss LOC100130417 LOC107985728 HES4 NOC2L SAMD11 PLEKHN1 PERM1 KLHL17 LOC284600 AGRN ISG15
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain LOC105378948 TTLL10-AS1 LOC100130417 DVL1 ANKRD65 RNF223 MIR200B AGRN LOC100288175 TNFRSF4 ACAP3 PUSL1 MIR6726 CPTP LOC107985728 TMEM88B MIR6727 TNFRSF18 PERM1 KLHL17 LOC284600 UBE2J2 TAS1R3 MIR429 B3GALT6 HES4 AURKAIP1 LOC148413 CPSF3L SCNN1D MXRA8 ISG15 MIR6808 SDF4 FAM132A MRPL20 TTLL10 C1orf159 NOC2L MIR200A LINC01342 SAMD11 PLEKHN1 CCNL2
nsv544898 Chr.1:924665 - 943937 on Build GRCh38 Gain LOC107985728 SAMD11
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain LINC01128 LOC100130417 LOC107985728 HES4 NOC2L SAMD11 PLEKHN1 PERM1 KLHL17 LOC284600 FAM41C
nsv544924 Chr.1:934170 - 938178 on Build GRCh38 Gain+Loss SAMD11

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:


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