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See other AAMDC CNV Assays ›
Gene Symbol
AAMDC
Assay Reference Genome
Location

Chr.11:77878985 on build GRCh38
Cytoband
11q14.1
Assay ID Hs00601394_cn
Size
Availability Made To Order
Catalog # 4400291
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

28971

Gene Name:

adipogenesis associated Mth938 domain containing

Gene Aliases:

C11orf67, CK067, PTD015

Location:

Chr.11:77821114-77901281 on Build GRCh38

Assay Gene Location:

Within Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AAMDC NM_001316957.1 NP_001303886.1
NM_001316958.1 NP_001303887.1
NR_133637.1
XM_017017620.1 XP_016873109.1
AF092136.1 AAD40378.1
BC016854.2 AAH16854.1
BP270361.1
BX646013.1
CN362204.1

Target Gene Details

Entrez Gene ID:

92105

Gene Name:

integrator complex subunit 4

Gene Aliases:

INT4, MST093

Location:

Chr.11:77874491-77994849 on Build GRCh38

Assay Gene Location:

Within Exon 25
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
INTS4 NM_033547.3 23 2884 NP_291025.3
XM_011545352.2 24 3053 XP_011543654.1
XM_017018560.1 XP_016874049.1
AF172822.1 10 1270 AAQ13616.1
AK290866.1 23 2880
AL834171.1 23 2828
BC006369.1 11 1253 AAH06369.1
BC008013.1 19 2337 AAH08013.1
BC009859.2 13 1543 AAH09859.2
BC015664.2 24 3194 AAH15664.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv520740 Chr.11:77842592 - 78286890 on Build GRCh38 Gain AAMDC KCTD14 THRSP NDUFC2 RSF1 KCTD21 KCTD21-AS1 GAB2 ALG8 INTS4 USP35 NDUFC2-KCTD14
nsv524537 Chr.11:77872220 - 77882175 on Build GRCh38 Loss AAMDC RSF1 INTS4
nsv555453 Chr.11:77866448 - 77907395 on Build GRCh38 Loss AAMDC RSF1 INTS4
nsv1050891 Chr.11:77705600 - 78076956 on Build GRCh38 Gain AAMDC KCTD14 THRSP NDUFC2 RSF1 RPS20P27 INTS4 NDUFC2-KCTD14

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More Information


Set Membership:

Intragenic Exonic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of apoptotic process
positive regulation of fat cell differentiation
positive regulation of transcription from RNA polymerase II promoter
snRNA processing
snRNA transcription from RNA polymerase II promoter
protein binding

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