Genomic Map
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Target Gene Details
Entrez Gene ID: | 148398 |
Gene Name: | sterile alpha motif domain containing 11 |
Gene Aliases: |
MRS |
Location: |
Chr.1:925741-944581 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 3 - Intron 4 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SAMD11 | NM_152486.2 | NP_689699.2 | ||
| CN293867.1 | ||||
| CN342795.1 | ||||
| JX093066.1 | ||||
| JX093067.1 | ||||
| JX093068.1 | ||||
| JX093069.1 | ||||
| JX093070.1 | ||||
| JX093071.1 | ||||
| JX093072.1 | ||||
| JX093073.1 | ||||
| JX093074.1 | ||||
| JX093075.1 | ||||
| JX093076.1 | ||||
| JX093077.1 | ||||
| JX093078.1 | ||||
| JX093079.1 | ||||
| JX093080.1 | ||||
| JX093081.1 | ||||
| JX093082.1 | ||||
| JX093083.1 | ||||
| JX093084.1 | ||||
| JX093085.1 | ||||
| JX093086.1 | ||||
| JX093087.1 | ||||
| JX093088.1 | ||||
| JX093089.1 | ||||
| JX093090.1 | ||||
| JX093091.1 | ||||
| JX093092.1 | ||||
| JX093093.1 | ||||
| JX093094.1 | ||||
| JX093095.1 | ||||
| JX093096.1 | ||||
| JX093097.1 | ||||
| JX093098.1 | ||||
| JX093099.1 | ||||
| JX093100.1 | ||||
| JX093101.1 | ||||
| JX093102.1 | ||||
| JX093103.1 | ||||
| JX093104.1 | ||||
| JX093105.1 | ||||
| JX093106.1 | ||||
| JX093107.1 | ||||
| JX093108.1 | ||||
| JX093109.1 | ||||
| JX093110.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv2762302 | Chr.1:914637 - 1106320 on Build GRCh38 | Gain |
 LOC100130417
RNF223
AGRN
KLHL17
LOC284600
LOC105378948
PLEKHN1
LOC107985728
SAMD11
ISG15
HES4
LOC100288175
PERM1
C1orf159
NOC2L
|
| nsv482937 | Chr.1:10001 - 2368561 on Build GRCh38 | Loss |
LOC148413
AGRN
ANKRD65
LINC01128
LINC01342
MMP23A
FAM87B
LOC105378949
LOC105378948
TTLL10
LOC107985729
LOC100132287
HES4
TMEM240
FNDC10
MIR200A
SDF4
SLC35E2B
LOC100133331
AURKAIP1
PRKCZ
MIR6859-1
WASH7P
CALML6
MIR6727
MTND2P28
TAS1R3
LOC101928626
TNFRSF18
MIR6726
GNB1
CPTP
SLC35E2
LOC107984841
CCNL2
MIR6808
CDK11B
NOC2L
LOC105378589
LOC100130417
RNF223
OR4F29
KLHL17
ATAD3B
MMP23B
LOC729737
LOC100288175
UBE2J2
MRPL20
DDX11L1
MIR1302-2
LOC100288069
FAAP20
OR4F5
MIR200B
LOC100129534
MORN1
FAM138A
LOC100506504
LOC102724312
MIR6723
TTLL10-AS1
CFAP74
FAM132A
SSU72
LOC100287934
PUSL1
B3GALT6
MIR429
LOC100134822
MTND1P23
LOC107985728
TMEM88B
NADK
MIB2
MIR6859-2
CPSF3L
LOC102725121
TMEM52
CDK11A
GABRD
FAM41C
ACAP3
LINC00115
SKI
PLEKHN1
DVL1
LOC105378947
LOC105378591
ATAD3A
TNFRSF4
VWA1
LOC105378592
LOC284600
MXRA8
SAMD11
ISG15
OR4F16
SCNN1D
PERM1
ATAD3C
C1orf159
|
| nsv544904 | Chr.1:929558 - 934877 on Build GRCh38 | Gain |
SAMD11
|
| nsv950451 | Chr.1:899421 - 1094520 on Build GRCh38 | Deletion |
LOC100130417
RNF223
AGRN
KLHL17
LOC284600
LOC105378948
PLEKHN1
LOC107985728
SAMD11
ISG15
HES4
LOC100288175
PERM1
C1orf159
NOC2L
|
| nsv509035 | Chr.1:891406 - 985724 on Build GRCh38 | Insertion |
LOC100130417
PLEKHN1
LOC107985728
SAMD11
KLHL17
PERM1
NOC2L
LOC284600
|
| dgv9n54 | Chr.1:925754 - 952840 on Build GRCh38 | Loss |
SAMD11
NOC2L
|
| nsv428334 | Chr.1:874371 - 1220569 on Build GRCh38 | Gain |
AGRN
FAM41C
LINC01342
TNFRSF18
MIR200B
LOC105378948
TTLL10
PLEKHN1
TTLL10-AS1
HES4
NOC2L
LOC100130417
RNF223
KLHL17
TNFRSF4
MIR200A
SDF4
LOC284600
MIR429
LOC107985728
SAMD11
ISG15
LOC100288175
PERM1
C1orf159
|
| nsv10161 | Chr.1:776731 - 1777210 on Build GRCh38 | Gain+Loss |
LOC148413
AGRN
ANKRD65
LINC01128
LOC100288069
LINC01342
MMP23A
FAM87B
MIR200B
LOC105378948
TTLL10
LOC107985729
LOC102724312
TTLL10-AS1
HES4
TMEM240
FNDC10
FAM132A
SSU72
LOC100287934
MIR200A
SDF4
SLC35E2B
PUSL1
AURKAIP1
B3GALT6
MIR429
LOC107985728
TMEM88B
NADK
MIB2
CPSF3L
MIR6727
CDK11A
TAS1R3
FAM41C
TNFRSF18
ACAP3
MIR6726
CPTP
LINC00115
SLC35E2
PLEKHN1
CCNL2
MIR6808
DVL1
CDK11B
NOC2L
LOC100130417
ATAD3A
RNF223
KLHL17
TNFRSF4
ATAD3B
MMP23B
VWA1
LOC284600
MXRA8
SAMD11
ISG15
LOC100288175
UBE2J2
SCNN1D
PERM1
MRPL20
ATAD3C
C1orf159
|
| dgv5n100 | Chr.1:585989 - 1114424 on Build GRCh38 | Gain |
AGRN
MTND2P28
LOC101928626
LINC01128
FAM41C
LOC100288069
FAM87B
LOC105378948
LINC00115
PLEKHN1
LOC107984841
MIR6723
HES4
NOC2L
LOC105378947
LOC100130417
RNF223
LOC100287934
KLHL17
LOC100133331
LOC284600
MTND1P23
LOC107985728
SAMD11
ISG15
OR4F16
LOC100288175
PERM1
C1orf159
|
| nsv517709 | Chr.1:817186 - 1275912 on Build GRCh38 | Gain+Loss |
AGRN
LINC01128
FAM41C
LINC01342
TNFRSF18
FAM87B
MIR200B
LOC105378948
LINC00115
TTLL10
PLEKHN1
TTLL10-AS1
HES4
NOC2L
LOC100130417
RNF223
FAM132A
KLHL17
TNFRSF4
MIR200A
SDF4
LOC284600
B3GALT6
MIR429
LOC107985728
SAMD11
ISG15
LOC100288175
UBE2J2
PERM1
C1orf159
|
| dgv1n111 | Chr.1:690090 - 939522 on Build GRCh38 | Duplication |
LOC100130417
LOC100287934
LINC01128
FAM41C
LOC100288069
FAM87B
LOC100133331
LOC284600
LINC00115
LOC107985728
SAMD11
LOC107984841
OR4F16
|
| dgv3n111 | Chr.1:783283 - 939522 on Build GRCh38 | Duplication |
LOC100130417
LINC00115
LOC107985728
SAMD11
LOC100287934
LINC01128
FAM41C
FAM87B
LOC284600
|
| dgv6n54 | Chr.1:917392 - 934930 on Build GRCh38 | Loss |
LOC100130417
LOC107985728
SAMD11
LOC284600
|
| dgv2n67 | Chr.1:877618 - 1426500 on Build GRCh38 | Gain |
LOC148413
CPSF3L
MIR6727
AGRN
TAS1R3
ANKRD65
LINC01342
TNFRSF18
ACAP3
MIR6726
CPTP
MIR200B
LOC105378948
TTLL10
PLEKHN1
CCNL2
MIR6808
TTLL10-AS1
HES4
DVL1
NOC2L
LOC100130417
RNF223
FAM132A
KLHL17
TNFRSF4
MIR200A
SDF4
PUSL1
LOC284600
AURKAIP1
MXRA8
B3GALT6
MIR429
LOC107985728
TMEM88B
SAMD11
ISG15
LOC100288175
UBE2J2
SCNN1D
PERM1
MRPL20
C1orf159
|
| nsv544898 | Chr.1:924665 - 943937 on Build GRCh38 | Gain |
LOC107985728
SAMD11
|
| nsv832980 | Chr.1:848279 - 1007037 on Build GRCh38 | Gain |
LOC100130417
PLEKHN1
LOC107985728
SAMD11
KLHL17
LINC01128
FAM41C
HES4
PERM1
NOC2L
LOC284600
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
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