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Gene Symbol
TNFRSF18
Assay Reference Genome
Location

Chr.1:1206396 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00812732_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8784

Gene Name:

 TNF receptor superfamily member 18

Gene Aliases:

 AITR, CD357, GITR, GITR-D

Location:

 Chr.1:1203508-1207900 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TNFRSF18 NM_004195.2 NP_004186.1
NM_148901.1 NP_683699.1
NM_148902.1 NP_683700.1
XM_017002722.1 XP_016858211.1
AF117297.1 AAD19694.1
AF125304.1 AAD22635.1
AF241229.1 AAF63506.1
AY358877.1 AAQ89236.1
BC152381.1
BC152386.1
BE244247.1
BT019531.1 AAV38338.1
BT019532.1 AAV38339.1
KP067911.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC107984841 LOC105378949 MIR1302-2 AGRN MIR200A GNB1 LOC102724312 ATAD3A SAMD11 FAAP20 MXRA8 TAS1R3 LOC100129534 LOC100133331 PRKCZ LOC100132287 UBE2J2 MIR6727 ATAD3B LOC148413 ATAD3C CCNL2 MIR6726 ACAP3 OR4F29 RNF223 CALML6 LINC01128 MIR429 LOC105378589 LOC101928626 TTLL10-AS1 CPTP SDF4 KLHL17 LOC100288175 MRPL20 LINC00115 MIR200B MIR6859-1 B3GALT6 CDK11A TTLL10 MMP23B C1orf159 MIB2 LOC100288069 OR4F5 MIR6808 LOC100287934 LOC729737 PUSL1 AURKAIP1 LOC105378592 WASH7P FAM87B NOC2L SLC35E2 PERM1 ISG15 NADK SLC35E2B TMEM240 MMP23A MIR6723 FAM41C SKI MTND1P23 DVL1 TNFRSF18 SCNN1D MIR6859-2 HES4 LOC284600 TNFRSF4 LOC105378948 DDX11L1 CDK11B LOC100134822 LOC105378947 MORN1 LOC102725121 LOC105378591 LOC100130417 CPSF3L GABRD OR4F16 SSU72 TMEM88B CFAP74 FAM138A VWA1 LOC107985729 LOC107985728 LOC100506504 FNDC10 PLEKHN1 TMEM52 MTND2P28 FAM132A ANKRD65 LINC01342
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain TTLL10-AS1 TNFRSF4 LOC105378948 UBE2J2 SDF4 MIR200A TNFRSF18 RNF223 SCNN1D MIR200B B3GALT6 TTLL10 FAM132A C1orf159 MIR429 LINC01342
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss MIR6808 MIR6726 ACAP3 TNFRSF4 PUSL1 AURKAIP1 MIR200A RNF223 MXRA8 TAS1R3 MIR429 CPSF3L TTLL10-AS1 UBE2J2 MIR6727 DVL1 CPTP SDF4 TNFRSF18 SCNN1D MIR200B B3GALT6 TTLL10 FAM132A C1orf159 LINC01342
nsv544960 Chr.1:1204036 - 1207482 on Build GRCh38 Loss TNFRSF18
nsv544956 Chr.1:1171093 - 1241217 on Build GRCh38 Loss TNFRSF18 TTLL10-AS1 TNFRSF4 B3GALT6 TTLL10 SDF4
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication MIR6726 ACAP3 TNFRSF4 LOC105378948 AGRN PUSL1 MIR200A RNF223 TAS1R3 MIR429 CPSF3L TTLL10-AS1 UBE2J2 MIR6727 CPTP SDF4 LOC100288175 TNFRSF18 SCNN1D MIR200B B3GALT6 TTLL10 FAM132A C1orf159 LINC01342
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain LOC284600 TNFRSF4 LOC105378948 AGRN MIR200A SAMD11 RNF223 NOC2L PERM1 ISG15 LOC100130417 MIR429 TTLL10-AS1 FAM41C LOC107985728 SDF4 KLHL17 LOC100288175 TNFRSF18 PLEKHN1 MIR200B TTLL10 HES4 C1orf159 LINC01342
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss MIR6808 LOC100287934 AGRN PUSL1 AURKAIP1 MIR200A FAM87B LOC102724312 ATAD3A SAMD11 NOC2L SLC35E2 PERM1 ISG15 NADK MXRA8 TAS1R3 SLC35E2B TMEM240 MMP23A UBE2J2 FAM41C MIR6727 DVL1 ATAD3B LOC148413 ATAD3C TNFRSF18 SCNN1D CCNL2 HES4 LOC284600 MIR6726 ACAP3 TNFRSF4 LOC105378948 CDK11B RNF223 LINC01128 LOC100130417 MIR429 CPSF3L TTLL10-AS1 SSU72 TMEM88B VWA1 LOC107985729 LOC107985728 CPTP SDF4 KLHL17 LOC100288175 MRPL20 LINC00115 FNDC10 PLEKHN1 MIR200B B3GALT6 CDK11A TTLL10 MMP23B FAM132A C1orf159 MIB2 LOC100288069 ANKRD65 LINC01342
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion MIR6808 MIR6726 ACAP3 TNFRSF4 PUSL1 CDK11B AURKAIP1 MIR200A LOC102724312 ATAD3A MXRA8 TAS1R3 MIR429 CPSF3L TMEM240 TTLL10-AS1 SSU72 TMEM88B UBE2J2 VWA1 LOC107985729 MIR6727 DVL1 ATAD3B CPTP SDF4 LOC148413 ATAD3C MRPL20 TNFRSF18 FNDC10 SCNN1D MIR200B B3GALT6 TTLL10 MMP23B CCNL2 FAM132A C1orf159 MIB2 ANKRD65 LINC01342
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss LOC284600 TNFRSF4 LOC105378948 AGRN MIR200A FAM87B SAMD11 RNF223 NOC2L PERM1 ISG15 LINC01128 LOC100130417 MIR429 TTLL10-AS1 UBE2J2 FAM41C LOC107985728 SDF4 KLHL17 LOC100288175 LINC00115 TNFRSF18 PLEKHN1 MIR200B B3GALT6 TTLL10 FAM132A HES4 C1orf159 LINC01342
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion TTLL10-AS1 TNFRSF4 LOC105378948 AGRN SDF4 MIR200A KLHL17 LOC100288175 TNFRSF18 SAMD11 PLEKHN1 RNF223 NOC2L MIR200B PERM1 ISG15 TTLL10 HES4 C1orf159 MIR429 LINC01342
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MIR6808 LOC284600 MIR6726 ACAP3 TNFRSF4 LOC105378948 AGRN PUSL1 AURKAIP1 MIR200A SAMD11 RNF223 NOC2L PERM1 ISG15 MXRA8 TAS1R3 LOC100130417 MIR429 CPSF3L TTLL10-AS1 TMEM88B UBE2J2 LOC107985728 MIR6727 DVL1 CPTP SDF4 LOC148413 KLHL17 LOC100288175 MRPL20 TNFRSF18 PLEKHN1 SCNN1D MIR200B B3GALT6 TTLL10 CCNL2 FAM132A HES4 C1orf159 ANKRD65 LINC01342
dgv24n54 Chr.1:1205055 - 1213515 on Build GRCh38 Loss TNFRSF18 TNFRSF4
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain MIR6726 TTLL10-AS1 ACAP3 TNFRSF4 UBE2J2 PUSL1 MIR6727 SDF4 MIR200A TNFRSF18 SCNN1D MIR200B B3GALT6 TTLL10 FAM132A MIR429 CPSF3L

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