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Gene Symbol
PUSL1
Assay Reference Genome
Location

Chr.1:1309711 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00934037_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126789

Gene Name:

 pseudouridylate synthase-like 1

Gene Aliases:

 -

Location:

 Chr.1:1308562-1311677 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PUSL1 NM_153339.1 NP_699170.1
XM_005244720.3 XP_005244777.1
AK027721.1 2 598
AK075292.1 BAC11527.1
AK298218.1
BC034304.1 AAH34304.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC107985728 TMEM240 B3GALT6 FAM132A LOC105378947 MIR1302-2 CDK11B LOC105378589 CDK11A SCNN1D RNF223 FAM87B TTLL10 LOC148413 ACAP3 C1orf159 LOC105378949 SLC35E2B TMEM88B FAAP20 TTLL10-AS1 PUSL1 SDF4 KLHL17 SLC35E2 CCNL2 SSU72 MMP23A DVL1 LINC01342 MIR6859-1 TAS1R3 LOC100129534 AURKAIP1 PERM1 OR4F5 FAM41C LOC102724312 MIR6808 LOC100132287 MIR6859-2 LOC100288069 LOC100134822 LOC105378591 HES4 CPTP LOC100133331 OR4F16 LOC107984841 FNDC10 MMP23B NOC2L MTND2P28 MTND1P23 OR4F29 TNFRSF18 ANKRD65 MXRA8 MIR6727 LOC101928626 MIR429 LINC01128 LOC729737 AGRN GABRD FAM138A MIR200B LOC100130417 MIR200A LOC107985729 SAMD11 LOC100287934 TMEM52 UBE2J2 LOC102725121 ATAD3A GNB1 ATAD3C DDX11L1 SKI NADK VWA1 ISG15 MIR6723 PRKCZ LINC00115 MIB2 MORN1 CALML6 LOC100506504 PLEKHN1 LOC100288175 LOC105378592 CPSF3L WASH7P LOC105378948 MIR6726 CFAP74 ATAD3B TNFRSF4 MRPL20 LOC284600
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss TAS1R3 CPTP MIR6727 MIR6726 MIR6808 DVL1 CPSF3L PUSL1 ACAP3
nsv544969 Chr.1:1290683 - 1374597 on Build GRCh38 Loss TAS1R3 CPTP MXRA8 SCNN1D MIR6727 MIR6726 MIR6808 AURKAIP1 DVL1 CPSF3L PUSL1 ACAP3
nsv997291 Chr.1:1306835 - 1376336 on Build GRCh38 Gain TAS1R3 CPTP MXRA8 MIR6727 MIR6808 AURKAIP1 DVL1 CPSF3L PUSL1 ACAP3
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss TAS1R3 TNFRSF18 B3GALT6 AURKAIP1 FAM132A MXRA8 SCNN1D MIR6727 RNF223 MIR6808 MIR429 TTLL10 ACAP3 C1orf159 MIR200B CPSF3L TTLL10-AS1 PUSL1 MIR200A SDF4 CPTP UBE2J2 MIR6726 DVL1 TNFRSF4 LINC01342
dgv6n100 Chr.1:1301750 - 1362354 on Build GRCh38 Gain+Loss TAS1R3 CPTP MXRA8 MIR6727 MIR6808 DVL1 CPSF3L PUSL1 ACAP3
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion TAS1R3 CPTP MXRA8 SCNN1D MIR6727 MIR6726 MIR6808 AURKAIP1 DVL1 CPSF3L PUSL1 ACAP3
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication TAS1R3 TNFRSF18 B3GALT6 FAM132A SCNN1D MIR6727 RNF223 MIR429 TTLL10 AGRN ACAP3 C1orf159 LOC100288175 MIR200B CPSF3L TTLL10-AS1 PUSL1 MIR200A SDF4 CPTP UBE2J2 LOC105378948 MIR6726 TNFRSF4 LINC01342
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss NOC2L LOC107985728 TMEM240 TNFRSF18 B3GALT6 FAM132A CDK11B ANKRD65 MXRA8 CDK11A SCNN1D MIR6727 RNF223 FAM87B MIR429 TTLL10 LINC01128 AGRN LOC148413 ACAP3 C1orf159 SLC35E2B TMEM88B MIR200B TTLL10-AS1 LOC100130417 PUSL1 MIR200A LOC107985729 SDF4 SAMD11 LOC100287934 UBE2J2 KLHL17 SLC35E2 CCNL2 SSU72 MMP23A DVL1 ATAD3A LINC01342 TAS1R3 ATAD3C AURKAIP1 PERM1 NADK VWA1 ISG15 FAM41C LINC00115 MIB2 LOC102724312 MIR6808 PLEKHN1 LOC100288069 LOC100288175 HES4 CPSF3L CPTP LOC105378948 MIR6726 ATAD3B TNFRSF4 MRPL20 FNDC10 LOC284600 MMP23B
esv3890636 Chr.1:1304555 - 1353203 on Build GRCh38 Loss TAS1R3 CPTP MXRA8 MIR6727 MIR6808 DVL1 CPSF3L PUSL1 ACAP3
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain TAS1R3 CPTP MXRA8 SCNN1D MIR6727 MIR6726 MIR6808 DVL1 CPSF3L PUSL1 ACAP3
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion TAS1R3 ATAD3C TMEM240 TNFRSF18 B3GALT6 AURKAIP1 FAM132A CDK11B VWA1 ANKRD65 MXRA8 SCNN1D MIR6727 MIB2 LOC102724312 MIR6808 MIR429 TTLL10 LOC148413 ACAP3 C1orf159 TMEM88B MIR200B CPSF3L TTLL10-AS1 PUSL1 MIR200A LOC107985729 SDF4 CPTP UBE2J2 CCNL2 SSU72 MIR6726 DVL1 ATAD3B TNFRSF4 ATAD3A MRPL20 FNDC10 LINC01342 MMP23B
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss TAS1R3 AURKAIP1 CPSF3L PUSL1 CPTP UBE2J2 MXRA8 SCNN1D MIR6727 MIR6726 MIR6808 DVL1 ACAP3
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain NOC2L LOC107985728 TAS1R3 TNFRSF18 B3GALT6 AURKAIP1 FAM132A PERM1 ISG15 ANKRD65 MXRA8 SCNN1D MIR6727 RNF223 MIR6808 MIR429 TTLL10 AGRN PLEKHN1 LOC148413 ACAP3 C1orf159 TMEM88B LOC100288175 HES4 MIR200B CPSF3L TTLL10-AS1 LOC100130417 PUSL1 MIR200A SDF4 SAMD11 CPTP UBE2J2 KLHL17 LOC105378948 CCNL2 MIR6726 DVL1 TNFRSF4 MRPL20 LOC284600 LINC01342
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain TNFRSF18 B3GALT6 MIR200B FAM132A CPSF3L TTLL10-AS1 PUSL1 MIR200A SDF4 UBE2J2 SCNN1D MIR6727 MIR6726 MIR429 TTLL10 TNFRSF4 ACAP3

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

lyase

Gene Ontology Categories:

Function(s) Process(es)


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