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Gene Symbol
TNFRSF18
Assay Reference Genome
Location

Chr.1:1204090 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01421882_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8784

Gene Name:

 TNF receptor superfamily member 18

Gene Aliases:

 AITR, CD357, GITR, GITR-D

Location:

 Chr.1:1203508-1207900 on Build GRCh38

Assay Gene Location:

 Within Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TNFRSF18 NM_004195.2 4 683 NP_004186.1
NM_148901.1 NP_683699.1
NM_148902.1 NP_683700.1
XM_017002722.1 4 1874 XP_016858211.1
AF117297.1 AAD19694.1
AF125304.1 4 545 AAD22635.1
AF241229.1 AAF63506.1
AY358877.1 4 665 AAQ89236.1
BC152381.1 4 548
BC152386.1 4 548
BT019531.1 4 545 AAV38338.1
BT019532.1 4 545 AAV38339.1
KP067911.1 4 683

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MTND2P28 ACAP3 VWA1 PRKCZ LOC100288069 LOC105378592 LOC105378589 CDK11B LOC100287934 TMEM88B UBE2J2 OR4F16 MRPL20 LOC100129534 MIR200A LOC100134822 LINC01128 MIR6726 CPTP ATAD3C SAMD11 LOC107985729 LOC107985728 ANKRD65 SDF4 LOC100506504 LOC100132287 OR4F29 GABRD CFAP74 SLC35E2B C1orf159 DDX11L1 B3GALT6 LOC105378591 FAM41C NOC2L MIB2 LOC107984841 TAS1R3 SKI LINC01342 MIR6727 NADK FAAP20 LOC148413 KLHL17 LOC105378947 TTLL10 MIR429 FAM132A FNDC10 SSU72 SLC35E2 CCNL2 WASH7P ATAD3A LOC100130417 TNFRSF18 SCNN1D MIR1302-2 LOC102725121 PERM1 MIR6859-2 PUSL1 LOC105378949 LOC102724312 TMEM240 GNB1 HES4 MMP23B LOC100133331 DVL1 FAM87B MORN1 AURKAIP1 MIR200B CPSF3L LOC284600 PLEKHN1 ISG15 CDK11A FAM138A MIR6859-1 AGRN TMEM52 RNF223 MTND1P23 LOC101928626 TNFRSF4 CALML6 OR4F5 TTLL10-AS1 LINC00115 LOC100288175 MIR6723 MXRA8 MMP23A LOC105378948 ATAD3B MIR6808 LOC729737
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain TNFRSF18 SCNN1D RNF223 LOC105378948 C1orf159 MIR200B TTLL10 MIR429 B3GALT6 TNFRSF4 SDF4 FAM132A UBE2J2 TTLL10-AS1 MIR200A LINC01342
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss ACAP3 TNFRSF18 SCNN1D RNF223 C1orf159 B3GALT6 TNFRSF4 UBE2J2 TTLL10-AS1 PUSL1 MIR200A TAS1R3 MIR6726 LINC01342 MIR6727 CPTP DVL1 AURKAIP1 MXRA8 MIR200B TTLL10 CPSF3L MIR429 MIR6808 SDF4 FAM132A
nsv544960 Chr.1:1204036 - 1207482 on Build GRCh38 Loss TNFRSF18
nsv544956 Chr.1:1171093 - 1241217 on Build GRCh38 Loss SDF4 TNFRSF18 TTLL10-AS1 TTLL10 B3GALT6 TNFRSF4
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication AGRN ACAP3 TNFRSF18 SCNN1D RNF223 C1orf159 B3GALT6 TNFRSF4 UBE2J2 TTLL10-AS1 PUSL1 LOC100288175 MIR200A TAS1R3 MIR6726 LINC01342 MIR6727 CPTP LOC105378948 MIR200B TTLL10 CPSF3L MIR429 SDF4 FAM132A
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain AGRN LOC100130417 TNFRSF18 RNF223 C1orf159 TNFRSF4 FAM41C PERM1 TTLL10-AS1 NOC2L LOC100288175 MIR200A LINC01342 HES4 SAMD11 LOC105378948 KLHL17 MIR200B TTLL10 LOC284600 LOC107985728 MIR429 PLEKHN1 SDF4 ISG15
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss ACAP3 VWA1 LOC100130417 TNFRSF18 SCNN1D LOC100288069 CDK11B LOC100287934 TMEM88B UBE2J2 PERM1 MRPL20 PUSL1 LOC102724312 TMEM240 MIR200A LINC01128 MIR6726 HES4 CPTP ATAD3C MMP23B SAMD11 DVL1 FAM87B AURKAIP1 LOC107985729 MIR200B CPSF3L LOC284600 LOC107985728 ANKRD65 PLEKHN1 SDF4 ISG15 CDK11A AGRN SLC35E2B RNF223 C1orf159 B3GALT6 TNFRSF4 FAM41C TTLL10-AS1 LINC00115 NOC2L LOC100288175 MIB2 TAS1R3 LINC01342 MIR6727 NADK MXRA8 MMP23A LOC105378948 LOC148413 KLHL17 TTLL10 ATAD3B MIR429 MIR6808 FAM132A FNDC10 SSU72 SLC35E2 CCNL2 ATAD3A
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion ACAP3 VWA1 TNFRSF18 SCNN1D C1orf159 B3GALT6 TNFRSF4 CDK11B TMEM88B UBE2J2 MRPL20 TTLL10-AS1 PUSL1 LOC102724312 TMEM240 MIB2 MIR200A TAS1R3 MIR6726 LINC01342 MIR6727 CPTP ATAD3C MMP23B DVL1 AURKAIP1 LOC107985729 MXRA8 LOC148413 MIR200B TTLL10 CPSF3L ATAD3B MIR429 MIR6808 ANKRD65 SDF4 FAM132A FNDC10 SSU72 CCNL2 ATAD3A
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss AGRN LOC100130417 TNFRSF18 RNF223 C1orf159 B3GALT6 TNFRSF4 FAM41C UBE2J2 PERM1 TTLL10-AS1 LINC00115 NOC2L LOC100288175 MIR200A LINC01128 LINC01342 HES4 SAMD11 FAM87B LOC105378948 KLHL17 MIR200B TTLL10 LOC284600 LOC107985728 MIR429 PLEKHN1 SDF4 FAM132A ISG15
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion AGRN TNFRSF18 SAMD11 RNF223 LOC105378948 C1orf159 KLHL17 MIR200B TTLL10 MIR429 TNFRSF4 PLEKHN1 SDF4 PERM1 ISG15 TTLL10-AS1 NOC2L LOC100288175 MIR200A LINC01342 HES4
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain AGRN ACAP3 LOC100130417 TNFRSF18 SCNN1D RNF223 C1orf159 B3GALT6 TNFRSF4 TMEM88B UBE2J2 PERM1 MRPL20 TTLL10-AS1 PUSL1 NOC2L LOC100288175 MIR200A TAS1R3 MIR6726 LINC01342 HES4 MIR6727 CPTP SAMD11 DVL1 AURKAIP1 MXRA8 LOC105378948 LOC148413 KLHL17 MIR200B TTLL10 CPSF3L LOC284600 LOC107985728 MIR429 MIR6808 ANKRD65 PLEKHN1 SDF4 FAM132A ISG15 CCNL2
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain MIR6727 ACAP3 TNFRSF18 SCNN1D MIR200B TTLL10 CPSF3L MIR429 B3GALT6 TNFRSF4 SDF4 FAM132A UBE2J2 TTLL10-AS1 PUSL1 MIR200A MIR6726

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