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Gene Symbol
CPSF3L
Assay Reference Genome
Location

Chr.1:1311637 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01444701_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
Your Price
Online offer:
4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 54973

Gene Name:

 cleavage and polyadenylation specific factor 3-like

Gene Aliases:

 CPSF73L, INT11, INTS11, RC-68, RC68

Location:

 Chr.1:1311585-1324687 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 19
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPSF3L NM_001256456.1 NP_001243385.1
NM_001256460.1 NP_001243389.1
NM_001256462.1 NP_001243391.1
NM_001256463.1 NP_001243392.1
NM_017871.5 NP_060341.2
XM_011541647.1 XP_011539949.1
XM_011541648.1 XP_011539950.1
XM_011541650.1 XP_011539952.1
XM_017001557.1 XP_016857046.1
XM_017001558.1 XP_016857047.1
AA687684.1
AK000549.1 BAA91246.1
AK021939.1 BAB13943.1
AK023356.1 BAB14541.1
AK056652.1
AK058018.1
AK092190.1
AK123641.1
AK291387.1
AL136813.1 CAB66747.1
BC000675.2 AAH00675.2
BC007978.2 AAH07978.1
BC008041.2 AAH08041.1
BC013904.2 AAH13904.2
BC020199.1 AAH20199.1
KF274554.1

Target Gene Details

Entrez Gene ID:

 126789

Gene Name:

 pseudouridylate synthase-like 1

Gene Aliases:

 -

Location:

 Chr.1:1308562-1311677 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PUSL1 NM_153339.1 8 1200 NP_699170.1
AK027721.1 4 2045
AK075292.1 8 1217 BAC11527.1
AK298218.1 7 1110
BC034304.1 8 1200 AAH34304.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss SLC35E2B TMEM88B LOC100506504 LOC107985729 CPSF3L MIR6859-1 SAMD11 CPTP LOC107984841 LOC100129534 KLHL17 MTND2P28 LOC100134822 CFAP74 OR4F16 TMEM52 MIR6808 MIR6723 CALML6 CDK11B FAM132A LINC01128 GNB1 TAS1R3 DDX11L1 MIR6726 FNDC10 FAAP20 LOC102725121 TTLL10 MMP23B MIR429 FAM41C LOC105378591 LOC105378948 ANKRD65 CDK11A LOC107985728 MRPL20 LINC01342 LOC105378949 ATAD3C LOC100287934 ISG15 ACAP3 VWA1 SKI TMEM240 LOC105378947 LOC100288175 MIR1302-2 MIR200B LOC105378592 AGRN OR4F5 MMP23A TTLL10-AS1 PUSL1 LINC00115 MIR6727 PLEKHN1 LOC100132287 B3GALT6 NADK C1orf159 MIR6859-2 MXRA8 PERM1 MIR200A LOC101928626 GABRD WASH7P LOC284600 LOC729737 FAM138A UBE2J2 LOC100288069 RNF223 SCNN1D MIB2 TNFRSF18 LOC105378589 MTND1P23 LOC148413 SSU72 NOC2L AURKAIP1 SLC35E2 ATAD3B OR4F29 CCNL2 HES4 ATAD3A DVL1 LOC102724312 MORN1 FAM87B SDF4 TNFRSF4 PRKCZ LOC100130417 LOC100133331
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss ACAP3 MIR6726 MIR6727 CPSF3L MIR6808 CPTP TAS1R3 PUSL1 DVL1
nsv544969 Chr.1:1290683 - 1374597 on Build GRCh38 Loss ACAP3 MIR6726 SCNN1D MIR6727 CPSF3L MIR6808 AURKAIP1 MXRA8 CPTP TAS1R3 PUSL1 DVL1
nsv997291 Chr.1:1306835 - 1376336 on Build GRCh38 Gain ACAP3 MIR6727 CPSF3L MIR6808 AURKAIP1 MXRA8 CPTP TAS1R3 PUSL1 DVL1
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss ACAP3 MIR200B UBE2J2 TAS1R3 RNF223 MIR6726 SCNN1D CPSF3L TTLL10-AS1 CPTP TNFRSF18 PUSL1 TTLL10 MIR429 MIR6727 AURKAIP1 B3GALT6 C1orf159 DVL1 SDF4 LINC01342 MIR6808 TNFRSF4 MXRA8 MIR200A FAM132A
dgv6n100 Chr.1:1301750 - 1362354 on Build GRCh38 Gain+Loss ACAP3 MIR6727 CPSF3L MIR6808 MXRA8 CPTP TAS1R3 PUSL1 DVL1
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion ACAP3 MIR6726 SCNN1D MIR6727 CPSF3L MIR6808 AURKAIP1 MXRA8 CPTP TAS1R3 PUSL1 DVL1
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication ACAP3 LOC100288175 MIR200B UBE2J2 TAS1R3 RNF223 MIR6726 SCNN1D AGRN CPSF3L TTLL10-AS1 CPTP TNFRSF18 PUSL1 TTLL10 MIR429 MIR6727 LOC105378948 B3GALT6 C1orf159 SDF4 LINC01342 TNFRSF4 MIR200A FAM132A
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss ACAP3 VWA1 SLC35E2B TMEM88B TMEM240 LOC100288175 MIR200B LOC107985729 AGRN CPSF3L MMP23A SAMD11 TTLL10-AS1 CPTP PUSL1 KLHL17 LINC00115 MIR6727 PLEKHN1 B3GALT6 NADK C1orf159 MIR6808 MXRA8 PERM1 CDK11B MIR200A FAM132A LINC01128 LOC284600 UBE2J2 TAS1R3 LOC100288069 RNF223 MIR6726 SCNN1D MIB2 TNFRSF18 FNDC10 LOC148413 TTLL10 SSU72 MMP23B MIR429 FAM41C NOC2L AURKAIP1 SLC35E2 ATAD3B LOC105378948 CCNL2 HES4 ANKRD65 ATAD3A DVL1 LOC102724312 CDK11A LOC107985728 FAM87B MRPL20 SDF4 LINC01342 TNFRSF4 ATAD3C LOC100130417 LOC100287934 ISG15
esv3890636 Chr.1:1304555 - 1353203 on Build GRCh38 Loss ACAP3 MIR6727 CPSF3L MIR6808 MXRA8 CPTP TAS1R3 PUSL1 DVL1
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain ACAP3 MIR6726 SCNN1D MIR6727 CPSF3L MIR6808 MXRA8 CPTP TAS1R3 PUSL1 DVL1
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion ACAP3 VWA1 TMEM88B TMEM240 MIR200B UBE2J2 TAS1R3 LOC107985729 MIR6726 SCNN1D CPSF3L MIB2 TTLL10-AS1 CPTP TNFRSF18 PUSL1 FNDC10 LOC148413 TTLL10 SSU72 MMP23B MIR429 MIR6727 AURKAIP1 ATAD3B B3GALT6 CCNL2 ANKRD65 ATAD3A C1orf159 DVL1 LOC102724312 MRPL20 SDF4 LINC01342 MIR6808 TNFRSF4 ATAD3C MXRA8 CDK11B MIR200A FAM132A
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss ACAP3 MIR6727 AURKAIP1 UBE2J2 TAS1R3 DVL1 MIR6726 SCNN1D CPSF3L MIR6808 MXRA8 CPTP PUSL1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain ACAP3 LOC284600 TMEM88B LOC100288175 MIR200B UBE2J2 TAS1R3 RNF223 MIR6726 SCNN1D AGRN CPSF3L SAMD11 TTLL10-AS1 CPTP TNFRSF18 PUSL1 LOC148413 KLHL17 TTLL10 MIR429 MIR6727 PLEKHN1 NOC2L AURKAIP1 LOC105378948 B3GALT6 CCNL2 HES4 ANKRD65 C1orf159 DVL1 LOC107985728 MRPL20 SDF4 LINC01342 MIR6808 TNFRSF4 MXRA8 LOC100130417 PERM1 MIR200A FAM132A ISG15
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain ACAP3 TTLL10 MIR429 MIR6727 B3GALT6 MIR200B UBE2J2 MIR6726 SDF4 SCNN1D CPSF3L TNFRSF4 TTLL10-AS1 MIR200A FAM132A TNFRSF18 PUSL1

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