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See other CPSF7 CNV Assays ›
Gene Symbol
CPSF7
Assay Reference Genome
Location

Chr.11:61404525 on build GRCh38
Cytoband
11q12.2
Assay ID Hs01584127_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

79869

Gene Name:

cleavage and polyadenylation specific factor 7

Gene Aliases:

CFIm59

Location:

Chr.11:61402648-61429992 on Build GRCh38

Assay Gene Location:

Within Exon 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPSF7 NM_001136040.2 10 1735 NP_001129512.1
NM_001142565.1 10 1708 NP_001136037.1
NM_024811.3 10 1811 NP_079087.3
XM_005274298.4 10 1794 XP_005274355.1
XM_005274299.4 10 1738 XP_005274356.1
XM_005274303.4 11 1766 XP_005274360.1
XM_011545257.2 11 1620 XP_011543559.1
XM_011545258.2 10 1692 XP_011543560.1
XM_011545259.2 10 1665 XP_011543561.1
XM_011545260.2 11 1812 XP_011543562.1
XM_011545261.2 11 1813 XP_011543563.1
XM_011545262.2 11 1759 XP_011543564.1
XM_011545263.2 11 1758 XP_011543565.1
XM_017018345.1 11 1593 XP_016873834.1
AK022591.1 5 1003 BAB14118.1
AK092037.1 11 1495
AK096343.1 10 1691
AK294578.1
AL512759.1 4 590 CAC21678.1
AL832546.1 8 1406
AL832667.1 10 1698
AL833332.1 10 1664
BC018135.1 10 1701 AAH18135.1
BX537888.1 10 1689 CAD97884.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv520751 Chr.11:61389584 - 61415916 on Build GRCh38 Gain TMEM216 CPSF7
nsv832178 Chr.11:61402074 - 61573390 on Build GRCh38 Gain+Loss LRRC10B MIR4488 SDHAF2 CPSF7 PPP1R32 SYT7

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More Information


Set Membership:

Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Function(s) Process(es)

mRNA splicing, via spliceosome
termination of RNA polymerase II transcription
mRNA 3'-end processing
protein tetramerization
nucleotide binding
protein binding
poly(A) RNA binding

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