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See other AAMDC CNV Assays ›
Gene Symbol
AAMDC
Assay Reference Genome
Location

Chr.11:77842612 on build GRCh38
Cytoband
11q14.1
Assay ID Hs01740696_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

28971

Gene Name:

adipogenesis associated Mth938 domain containing

Gene Aliases:

C11orf67, CK067, PTD015

Location:

Chr.11:77821114-77901281 on Build GRCh38

Assay Gene Location:

Overlaps Exon 5 - Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AAMDC NM_001316957.1 NP_001303886.1
NM_001316958.1 NP_001303887.1
NM_001316960.1 NP_001303889.1
NM_001316961.1 NP_001303890.1
NM_001316962.1 NP_001303891.1
NM_024684.3 NP_078960.1
NR_133637.1
XM_011544968.2 XP_011543270.1
XM_011544969.2 XP_011543271.1
XM_017017620.1 XP_016873109.1
AF092136.1 AAD40378.1
AI569731.1
AK024688.1 BAB14963.1
BC002752.2 AAH02752.1
BC016854.2 AAH16854.1
BI791786.1
BM930331.1
BP270361.1
BX646013.1
CN362204.1
CR457332.1 CAG33613.1

Target Gene Details

Entrez Gene ID:

51773

Gene Name:

remodeling and spacing factor 1

Gene Aliases:

HBXAP, RSF-1, XAP8, p325

Location:

Chr.11:77660009-77872232 on Build GRCh38

Assay Gene Location:

Within Intron 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
RSF1 XM_017017923.1 XP_016873412.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv520740 Chr.11:77842592 - 78286890 on Build GRCh38 Gain THRSP AAMDC KCTD21 INTS4 KCTD21-AS1 ALG8 RSF1 NDUFC2-KCTD14 USP35 NDUFC2 KCTD14 GAB2
nsv1050891 Chr.11:77705600 - 78076956 on Build GRCh38 Gain THRSP AAMDC INTS4 RSF1 NDUFC2-KCTD14 RPS20P27 NDUFC2 KCTD14

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More Information


Set Membership:

Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

histone modifying enzyme

Gene Ontology Categories:

Function(s) Process(es)

negative regulation of apoptotic process
positive regulation of fat cell differentiation
positive regulation of transcription from RNA polymerase II promoter
nucleosome assembly
chromatin remodeling
DNA-templated transcription, initiation
covalent chromatin modification
nucleosome positioning
CENP-A containing nucleosome assembly
negative regulation of DNA binding
negative regulation of transcription, DNA-templated
positive regulation of transcription, DNA-templated
positive regulation of viral transcription
protein binding
zinc ion binding
ATPase activity
histone binding

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