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Gene Symbol
CPSF3L
Assay Reference Genome
Location

Chr.1:1312032 on build GRCh38
Cytoband
1p36.33
Assay ID Hs01811232_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 54973

Gene Name:

 cleavage and polyadenylation specific factor 3-like

Gene Aliases:

 CPSF73L, INT11, INTS11, RC-68, RC68

Location:

 Chr.1:1311585-1324687 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 18 - Exon 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPSF3L NM_001256456.1 NP_001243385.1
NM_001256460.1 NP_001243389.1
NM_001256462.1 NP_001243391.1
NM_001256463.1 NP_001243392.1
NM_017871.5 NP_060341.2
XM_011541647.1 XP_011539949.1
XM_011541648.1 XP_011539950.1
XM_011541650.1 XP_011539952.1
XM_017001557.1 XP_016857046.1
XM_017001558.1 XP_016857047.1
AA687684.1
AK000549.1 BAA91246.1
AK021939.1 BAB13943.1
AK023356.1 BAB14541.1
AK056652.1
AK058018.1
AK092190.1
AK123641.1
AK291387.1
AK297350.1
AL136813.1 CAB66747.1
BC000675.2 AAH00675.2
BC007978.2 AAH07978.1
BC008041.2 AAH08041.1
BC013904.2 AAH13904.2
BC020199.1 AAH20199.1
CR533557.1 CAG38588.1
KF274554.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC102725121 CALML6 SAMD11 PUSL1 MRPL20 LOC105378949 LINC01128 C1orf159 B3GALT6 WASH7P TTLL10 RNF223 LOC105378947 FAM41C MIB2 AURKAIP1 MORN1 SLC35E2 MIR6726 LOC100287934 MIR6723 SSU72 FAM87B MIR1302-2 PRKCZ LOC107985728 KLHL17 ATAD3C LOC100288069 MMP23B LOC105378591 FAM138A TMEM52 FAM132A TMEM88B ANKRD65 LOC107984841 TNFRSF4 VWA1 LOC101928626 MIR6859-1 MIR200B LOC100129534 LOC102724312 CPTP SKI LOC284600 TNFRSF18 LOC100134822 MIR6808 MIR6859-2 PLEKHN1 CFAP74 MIR200A CDK11A ATAD3B LOC105378948 GNB1 TTLL10-AS1 NADK MTND1P23 MMP23A CDK11B LOC100288175 OR4F5 LOC729737 DDX11L1 LOC100130417 SDF4 TAS1R3 MXRA8 CPSF3L PERM1 FNDC10 LOC105378589 HES4 MIR6727 NOC2L LINC01342 GABRD ATAD3A ISG15 MTND2P28 UBE2J2 ACAP3 DVL1 LINC00115 CCNL2 LOC107985729 LOC100506504 AGRN LOC100132287 MIR429 FAAP20 OR4F29 LOC148413 SLC35E2B SCNN1D LOC105378592 OR4F16 TMEM240 LOC100133331
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss TAS1R3 MIR6727 CPTP PUSL1 CPSF3L ACAP3 MIR6808 DVL1 MIR6726
nsv544969 Chr.1:1290683 - 1374597 on Build GRCh38 Loss TAS1R3 SCNN1D MIR6727 CPTP PUSL1 MXRA8 AURKAIP1 CPSF3L ACAP3 MIR6808 DVL1 MIR6726
nsv997291 Chr.1:1306835 - 1376336 on Build GRCh38 Gain TAS1R3 MIR6727 CPTP PUSL1 MXRA8 AURKAIP1 CPSF3L ACAP3 MIR6808 DVL1
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss MIR200A PUSL1 TTLL10-AS1 UBE2J2 ACAP3 DVL1 FAM132A C1orf159 B3GALT6 TTLL10 MIR429 RNF223 TNFRSF4 SDF4 TAS1R3 SCNN1D MXRA8 MIR200B AURKAIP1 CPSF3L MIR6726 MIR6727 CPTP LINC01342 TNFRSF18 MIR6808
dgv6n100 Chr.1:1301750 - 1362354 on Build GRCh38 Gain+Loss TAS1R3 MIR6727 CPTP PUSL1 MXRA8 CPSF3L ACAP3 MIR6808 DVL1
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion TAS1R3 SCNN1D MIR6727 CPTP PUSL1 MXRA8 AURKAIP1 CPSF3L ACAP3 MIR6808 DVL1 MIR6726
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication MIR200A PUSL1 LOC105378948 TTLL10-AS1 UBE2J2 ACAP3 FAM132A C1orf159 B3GALT6 AGRN LOC100288175 TTLL10 MIR429 RNF223 TNFRSF4 SDF4 TAS1R3 SCNN1D MIR200B CPSF3L MIR6726 MIR6727 CPTP LINC01342 TNFRSF18
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss SAMD11 MIR200A PUSL1 CDK11A ATAD3B LOC105378948 TTLL10-AS1 NADK MRPL20 LINC01128 MMP23A C1orf159 B3GALT6 CDK11B LOC100288175 TTLL10 RNF223 LOC100130417 FAM41C SDF4 TAS1R3 MXRA8 MIB2 AURKAIP1 CPSF3L SLC35E2 PERM1 FNDC10 MIR6726 HES4 LOC100287934 MIR6727 NOC2L LINC01342 SSU72 FAM87B ATAD3A ISG15 LOC107985728 KLHL17 ATAD3C LOC100288069 MMP23B UBE2J2 ACAP3 DVL1 LINC00115 CCNL2 FAM132A TMEM88B LOC107985729 ANKRD65 AGRN MIR429 TNFRSF4 VWA1 LOC148413 SLC35E2B SCNN1D MIR200B TMEM240 LOC102724312 CPTP LOC284600 TNFRSF18 MIR6808 PLEKHN1
esv3890636 Chr.1:1304555 - 1353203 on Build GRCh38 Loss TAS1R3 MIR6727 CPTP PUSL1 MXRA8 CPSF3L ACAP3 MIR6808 DVL1
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain TAS1R3 SCNN1D MIR6727 CPTP PUSL1 MXRA8 CPSF3L ACAP3 MIR6808 DVL1 MIR6726
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion MIR200A PUSL1 ATAD3C ATAD3B TTLL10-AS1 MMP23B MRPL20 UBE2J2 ACAP3 DVL1 CCNL2 FAM132A TMEM88B C1orf159 LOC107985729 B3GALT6 ANKRD65 CDK11B TTLL10 MIR429 TNFRSF4 VWA1 SDF4 LOC148413 TAS1R3 SCNN1D MXRA8 MIB2 MIR200B AURKAIP1 CPSF3L TMEM240 FNDC10 LOC102724312 MIR6726 MIR6727 CPTP LINC01342 SSU72 TNFRSF18 MIR6808 ATAD3A
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss TAS1R3 SCNN1D PUSL1 MXRA8 AURKAIP1 CPSF3L UBE2J2 ACAP3 DVL1 MIR6726 MIR6727 CPTP MIR6808
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain SAMD11 MIR200A ISG15 LOC107985728 PUSL1 KLHL17 LOC105378948 TTLL10-AS1 MRPL20 UBE2J2 ACAP3 DVL1 CCNL2 FAM132A TMEM88B C1orf159 B3GALT6 ANKRD65 AGRN LOC100288175 TTLL10 MIR429 RNF223 TNFRSF4 LOC100130417 SDF4 LOC148413 TAS1R3 SCNN1D MXRA8 MIR200B AURKAIP1 CPSF3L PERM1 MIR6726 HES4 MIR6727 CPTP NOC2L LOC284600 LINC01342 TNFRSF18 MIR6808 PLEKHN1
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain SCNN1D MIR200A PUSL1 MIR200B CPSF3L TTLL10-AS1 UBE2J2 ACAP3 MIR6726 MIR6727 FAM132A B3GALT6 TTLL10 TNFRSF18 MIR429 TNFRSF4 SDF4

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Function(s) Process(es)


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