Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 27164 |
Gene Name: | spalt like transcription factor 3 |
Gene Aliases: |
ZNF796 |
Location: |
Chr.18:78980275-78998969 on Build GRCh38 |
Assay Gene Location: | Within Exon 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SALL3 | NM_171999.3 | 2 | 3354 | NP_741996.2 |
| BC148296.2 | 4 | 2331 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv577793 | Chr.18:78951024 - 79022312 on Build GRCh38 | Loss |
 SALL3
|
| nsv828333 | Chr.18:78955949 - 79017302 on Build GRCh38 | Loss |
SALL3
|
| nsv577794 | Chr.18:78951366 - 79472709 on Build GRCh38 | Gain |
LOC100996274
ATP9B
LOC107985149
SALL3
NFATC1
|
| nsv577795 | Chr.18:78972221 - 79050030 on Build GRCh38 | Loss |
SALL3
|
| nsv2377 | Chr.18:78991267 - 79025451 on Build GRCh38 | Insertion |
SALL3
|
| dgv564n67 | Chr.18:78952775 - 79013936 on Build GRCh38 | Gain |
SALL3
|
| nsv1065902 | Chr.18:78538045 - 80257174 on Build GRCh38 | Gain |
LOC100996274
ATP9B
LOC105376875
LOC107985149
SALL3
PARD6G
RBFADN
LOC284241
HSBP1L1
PQLC1
PARD6G-AS1
RBFA
TXNL4A
CTDP1
NFATC1
KCNG2
LOC284240
ADNP2
|
| nsv828338 | Chr.18:78963814 - 79001729 on Build GRCh38 | Gain |
SALL3
|
| esv2717497 | Chr.18:78170182 - 79635788 on Build GRCh38 | Deletion |
LOC100996274
ATP9B
LOC107985149
SALL3
NFATC1
LOC284240
|
| nsv1141945 | Chr.18:78170394 - 79635820 on Build GRCh38 | Deletion |
LOC100996274
ATP9B
LOC107985149
SALL3
NFATC1
LOC284240
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
Back To Top