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See other COX20 CNV Assays ›
Gene Symbol
COX20
Assay Reference Genome
Location

Chr.1:244844833 on build GRCh38
Cytoband
1q44
Assay ID Hs01964624_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

116228

Gene Name:

COX20, cytochrome c oxidase assembly factor

Gene Aliases:

FAM36A

Location:

Chr.1:244835306-244845063 on Build GRCh38

Assay Gene Location:

Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
COX20 NM_001312871.1 5 2281 NP_001299800.1
NM_001312872.1 5 2289 NP_001299801.1
NM_001312873.1 3 2118 NP_001299802.1
NM_001312874.1 4 2249 NP_001299803.1
NM_198076.5 4 2400 NP_932342.1
NR_132419.1 3 2138
NR_132420.1 4 2233
NR_132421.1 3 2114
BU732247.1 1 241
EL947693.1 1 315

Target Gene Details

Entrez Gene ID:

3192

Gene Name:

heterogeneous nuclear ribonucleoprotein U

Gene Aliases:

HNRNPU-AS1, HNRPU, SAF-A, SAFA, U21.1, hnRNP U

Location:

Chr.1:244842123-244864720 on Build GRCh38

Assay Gene Location:

Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
HNRNPU XM_017001115.1 15 11249 XP_016856604.1
XM_017001116.1 16 8973 XP_016856605.1
XM_017001117.1 15 11043 XP_016856606.1
AK095297.1 2 584

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv549493 Chr.1:244721983 - 244856983 on Build GRCh38 Gain SNORA100 HNRNPU COX20

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More Information


Set Membership:

Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

oxidase

Gene Ontology Categories:

Function(s) Process(es)

aerobic respiration
mitochondrial respiratory chain complex IV assembly
mRNA splicing, via spliceosome
osteoblast differentiation
RNA processing
gene expression
positive regulation of gene expression
negative regulation of telomere maintenance via telomerase
circadian regulation of gene expression
CRD-mediated mRNA stabilization
cellular response to dexamethasone stimulus
positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
core promoter binding
DNA binding
RNA binding
protein binding
ATP binding
poly(G) binding
enhancer binding
ribonucleoprotein complex binding
poly(A) RNA binding
telomerase RNA binding

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