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See other COMMD1 CNV Assays ›
Gene Symbol
COMMD1
Assay Reference Genome
Location

Chr.2:61905793 on build GRCh38
Cytoband
2p15
Assay ID Hs02311388_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

150684

Gene Name:

copper metabolism domain containing 1

Gene Aliases:

C2orf5, MURR1

Location:

Chr.2:61888723-62136070 on Build GRCh38

Assay Gene Location:

Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
COMMD1 NM_001321781.1 NP_001308710.1
NM_001321782.1 NP_001308711.1
NM_152516.3 1 152 NP_689729.1
XM_011532558.2 1 150 XP_011530860.1
AB178811.1 1 136 BAD18972.1
AK223607.1 1 141 BAD97327.1
AK294203.1 1 120
BC009266.2 1 105 AAH09266.2
BC022046.1 1 124 AAH22046.1
D85433.1 1 52
DT217730.1
HY001060.1 1 152
HY039942.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv582123 Chr.2:61719360 - 62324337 on Build GRCh38 Gain CCT4 COMMD1 FAM161A MIR5192 B3GNT2
nsv458074 Chr.2:61692252 - 62020316 on Build GRCh38 Gain CCT4 COMMD1 FAM161A
nsv470467 Chr.2:61786803 - 62020316 on Build GRCh38 Gain CCT4 COMMD1 FAM161A
nsv582118 Chr.2:61431550 - 62075525 on Build GRCh38 Gain CCT4 COMMD1 FAM161A XPO1 USP34
esv34000 Chr.2:61672382 - 62157212 on Build GRCh38 Loss CCT4 COMMD1 FAM161A
nsv1009446 Chr.2:61872503 - 61972765 on Build GRCh38 Gain CCT4 COMMD1

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More Information


Set Membership:

Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)

transcription, DNA-templated
Golgi to plasma membrane transport
protein transport
positive regulation of protein ubiquitination
negative regulation of NF-kappaB transcription factor activity
regulation of proteasomal ubiquitin-dependent protein catabolic process
plasma membrane to endosome transport
copper ion homeostasis
negative regulation of sodium ion transmembrane transport
negative regulation of protein localization to cell surface
copper ion binding
protein binding
phosphatidylinositol-4,5-bisphosphate binding
phosphatidylinositol-3,4,5-trisphosphate binding
identical protein binding
protein homodimerization activity
phosphatidylinositol-3,4-bisphosphate binding
phosphatidic acid binding
phosphatidylinositol-3,5-bisphosphate binding

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