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See other SALL3 CNV Assays ›
Gene Symbol
SALL3
Assay Reference Genome
Location

Chr.18:78997395 on build GRCh38
Cytoband
18q23
Assay ID Hs02337251_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

27164

Gene Name:

spalt like transcription factor 3

Gene Aliases:

ZNF796

Location:

Chr.18:78980275-78998969 on Build GRCh38

Assay Gene Location:

Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SALL3 NM_171999.3 3 3976 NP_741996.2
BC148296.2

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv577793 Chr.18:78951024 - 79022312 on Build GRCh38 Loss SALL3
nsv828333 Chr.18:78955949 - 79017302 on Build GRCh38 Loss SALL3
nsv577794 Chr.18:78951366 - 79472709 on Build GRCh38 Gain SALL3 ATP9B LOC107985149 LOC100996274 NFATC1
nsv577795 Chr.18:78972221 - 79050030 on Build GRCh38 Loss SALL3
nsv2377 Chr.18:78991267 - 79025451 on Build GRCh38 Insertion SALL3
dgv564n67 Chr.18:78952775 - 79013936 on Build GRCh38 Gain SALL3
nsv1065902 Chr.18:78538045 - 80257174 on Build GRCh38 Gain TXNL4A PARD6G LOC284241 KCNG2 LOC107985149 HSBP1L1 LOC100996274 CTDP1 RBFADN SALL3 ATP9B PQLC1 RBFA ADNP2 LOC284240 LOC105376875 PARD6G-AS1 NFATC1
nsv828338 Chr.18:78963814 - 79001729 on Build GRCh38 Gain SALL3
esv2717497 Chr.18:78170182 - 79635788 on Build GRCh38 Deletion SALL3 ATP9B LOC107985149 LOC284240 LOC100996274 NFATC1
nsv1141945 Chr.18:78170394 - 79635820 on Build GRCh38 Deletion SALL3 ATP9B LOC107985149 LOC284240 LOC100996274 NFATC1

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More Information


Set Membership:

Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Function(s) Process(es)

regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
signal transduction
olfactory bulb interneuron development
neurogenesis
forelimb morphogenesis
hindlimb morphogenesis
negative regulation of smoothened signaling pathway
transcription factor activity, sequence-specific DNA binding
sequence-specific DNA binding
transcription regulatory region DNA binding
metal ion binding

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