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Gene Symbol
SAMD11
Assay Reference Genome
Location

Chr.1:939356 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02371800_cn
Size
Availability Made To Order
Catalog # 4400291
Price 475.00
Your Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 148398

Gene Name:

 sterile alpha motif domain containing 11

Gene Aliases:

 MRS

Location:

 Chr.1:925741-944581 on Build GRCh38

Assay Gene Location:

 Within Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAMD11 NM_152486.2 7 682 NP_689699.2
AK054643.1 1 84 BAB70781.1
BC024295.2 3 305 AAH24295.1
BC033213.1 1 47 AAH33213.1
CN293867.1 4 322
JX093066.1 6 605
JX093067.1 6 605
JX093068.1 6 605
JX093069.1 6 602
JX093070.1 6 605
JX093071.1 6 602
JX093072.1 5 554
JX093073.1 6 605
JX093074.1 6 572
JX093075.1 6 605
JX093076.1
JX093077.1 6 602
JX093078.1 6 602
JX093079.1 6 605
JX093080.1 6 605
JX093081.1 6 602
JX093082.1 6 602
JX093083.1 6 602
JX093084.1 6 605
JX093085.1 6 605
JX093086.1 6 605
JX093087.1
JX093088.1 6 602
JX093089.1 6 602
JX093090.1 6 605
JX093091.1 4 429
JX093092.1 6 605
JX093093.1 6 602
JX093094.1 6 605
JX093095.1 6 602
JX093096.1
JX093097.1
JX093098.1
JX093099.1 7 690
JX093100.1 7 687
JX093101.1 7 690
JX093102.1
JX093103.1 6 639
JX093104.1 5 477
JX093105.1 5 480
JX093106.1 5 477
JX093107.1 5 477
JX093108.1 5 477
JX093109.1 4 369
JX093110.1 4 372

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv15n54 Chr.1:934063 - 943937 on Build GRCh38 Loss SAMD11
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain LOC284600 KLHL17 AGRN NOC2L C1orf159 PLEKHN1 ISG15 LOC105378948 SAMD11 LOC107985728 LOC100288175 LOC100130417 HES4 RNF223 PERM1
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC284600 MRPL20 CFAP74 PRKCZ MXRA8 SLC35E2B SDF4 ANKRD65 MIR6726 HES4 MMP23A KLHL17 LOC101928626 OR4F5 ATAD3A B3GALT6 CALML6 CCNL2 PUSL1 LOC105378948 LOC107985728 LOC102725121 LOC100288175 AURKAIP1 NADK MIB2 LOC100287934 VWA1 TMEM52 LINC01128 C1orf159 SLC35E2 LOC100288069 ATAD3B TMEM240 NOC2L FAM41C TTLL10-AS1 ISG15 CPSF3L MIR200B LOC100134822 MMP23B TNFRSF4 AGRN FNDC10 SCNN1D LOC105378589 PLEKHN1 SKI DDX11L1 LOC729737 SSU72 LOC100130417 OR4F16 LOC105378947 OR4F29 PERM1 MIR200A TNFRSF18 CPTP MIR1302-2 MTND2P28 GABRD MIR6859-2 TMEM88B ACAP3 MIR429 LOC100506504 SAMD11 MIR6727 WASH7P TAS1R3 LOC105378592 LOC105378949 FAM138A LOC100129534 UBE2J2 LOC102724312 ATAD3C FAAP20 LOC148413 FAM87B TTLL10 LINC01342 MTND1P23 CDK11B FAM132A LOC107984841 MORN1 MIR6723 LOC107985729 RNF223 LINC00115 MIR6808 GNB1 LOC105378591 MIR6859-1 LOC100132287 LOC100133331 DVL1 CDK11A
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion LOC284600 KLHL17 AGRN NOC2L C1orf159 PLEKHN1 ISG15 LOC105378948 SAMD11 LOC107985728 LOC100288175 LOC100130417 HES4 RNF223 PERM1
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion LOC284600 KLHL17 SAMD11 LOC107985728 LOC100130417 NOC2L PERM1 PLEKHN1
dgv9n54 Chr.1:925754 - 952840 on Build GRCh38 Loss SAMD11 NOC2L
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain LOC284600 AGRN C1orf159 TTLL10 PLEKHN1 LINC01342 SDF4 LOC100130417 HES4 RNF223 PERM1 MIR200A TNFRSF18 KLHL17 NOC2L FAM41C TTLL10-AS1 ISG15 LOC105378948 MIR429 SAMD11 LOC107985728 LOC100288175 MIR200B TNFRSF4
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC284600 MRPL20 AGRN FNDC10 SCNN1D PLEKHN1 MXRA8 SLC35E2B SDF4 ANKRD65 SSU72 LOC100130417 MIR6726 HES4 PERM1 MIR200A TNFRSF18 CPTP MMP23A KLHL17 ATAD3A TMEM88B B3GALT6 CCNL2 PUSL1 ACAP3 LOC105378948 MIR429 SAMD11 MIR6727 LOC107985728 LOC100288175 TAS1R3 AURKAIP1 NADK MIB2 LOC100287934 UBE2J2 LOC102724312 VWA1 ATAD3C LINC01128 C1orf159 LOC148413 FAM87B TTLL10 LINC01342 CDK11B FAM132A SLC35E2 LOC107985729 LOC100288069 RNF223 ATAD3B LINC00115 MIR6808 TMEM240 NOC2L FAM41C TTLL10-AS1 ISG15 CPSF3L MIR200B DVL1 MMP23B CDK11A TNFRSF4
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain LOC284600 LINC01128 AGRN C1orf159 FAM87B PLEKHN1 MTND1P23 LOC107984841 LOC100130417 OR4F16 MIR6723 HES4 LOC100288069 LOC105378947 RNF223 PERM1 LINC00115 KLHL17 LOC101928626 MTND2P28 NOC2L FAM41C ISG15 LOC100133331 LOC105378948 SAMD11 LOC107985728 LOC100288175 LOC100287934
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss LOC284600 UBE2J2 LINC01128 AGRN C1orf159 FAM87B TTLL10 PLEKHN1 LINC01342 FAM132A SDF4 LOC100130417 HES4 RNF223 PERM1 MIR200A TNFRSF18 LINC00115 KLHL17 NOC2L FAM41C B3GALT6 TTLL10-AS1 ISG15 LOC105378948 MIR429 SAMD11 LOC107985728 LOC100288175 MIR200B TNFRSF4
dgv1n111 Chr.1:690090 - 939522 on Build GRCh38 Duplication LOC284600 LINC01128 FAM41C FAM87B LOC100133331 SAMD11 LOC107984841 LOC107985728 LOC100130417 OR4F16 LOC100288069 LOC100287934 LINC00115
dgv3n111 Chr.1:783283 - 939522 on Build GRCh38 Duplication LOC284600 SAMD11 LINC01128 LOC107985728 LOC100130417 FAM41C FAM87B LOC100287934 LINC00115
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss LOC284600 ISG15 KLHL17 SAMD11 AGRN LOC107985728 LOC100130417 NOC2L HES4 PERM1 PLEKHN1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain LOC284600 MRPL20 UBE2J2 AGRN SCNN1D C1orf159 LOC148413 TTLL10 PLEKHN1 LINC01342 MXRA8 FAM132A SDF4 ANKRD65 LOC100130417 MIR6726 HES4 RNF223 PERM1 MIR200A TNFRSF18 CPTP MIR6808 KLHL17 NOC2L TMEM88B B3GALT6 TTLL10-AS1 CCNL2 ISG15 PUSL1 ACAP3 LOC105378948 MIR429 SAMD11 MIR6727 CPSF3L LOC107985728 LOC100288175 TAS1R3 AURKAIP1 MIR200B DVL1 TNFRSF4
nsv544898 Chr.1:924665 - 943937 on Build GRCh38 Gain SAMD11 LOC107985728
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain LOC284600 KLHL17 SAMD11 LINC01128 LOC107985728 LOC100130417 NOC2L HES4 FAM41C PERM1 PLEKHN1

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:


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