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Gene Symbol
SAMD11
Assay Reference Genome
Location

Chr.1:939356 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02371800_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 148398

Gene Name:

 sterile alpha motif domain containing 11

Gene Aliases:

 MRS

Location:

 Chr.1:925741-944581 on Build GRCh38

Assay Gene Location:

 Within Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAMD11 NM_152486.2 7 682 NP_689699.2
AK054643.1 1 84 BAB70781.1
BC024295.2 3 305 AAH24295.1
BC033213.1 1 47 AAH33213.1
CN293867.1 4 322
JX093066.1 6 605
JX093067.1 6 605
JX093068.1 6 605
JX093069.1 6 602
JX093070.1 6 605
JX093071.1 6 602
JX093072.1 5 554
JX093073.1 6 605
JX093074.1 6 572
JX093075.1 6 605
JX093076.1
JX093077.1 6 602
JX093078.1 6 602
JX093079.1 6 605
JX093080.1 6 605
JX093081.1 6 602
JX093082.1 6 602
JX093083.1 6 602
JX093084.1 6 605
JX093085.1 6 605
JX093086.1 6 605
JX093087.1
JX093088.1 6 602
JX093089.1 6 602
JX093090.1 6 605
JX093091.1 4 429
JX093092.1 6 605
JX093093.1 6 602
JX093094.1 6 605
JX093095.1 6 602
JX093096.1
JX093097.1
JX093098.1
JX093099.1 7 690
JX093100.1 7 687
JX093101.1 7 690
JX093102.1
JX093103.1 6 639
JX093104.1 5 477
JX093105.1 5 480
JX093106.1 5 477
JX093107.1 5 477
JX093108.1 5 477
JX093109.1 4 369
JX093110.1 4 372

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv15n54 Chr.1:934063 - 943937 on Build GRCh38 Loss SAMD11
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain LOC284600 NOC2L PERM1 LOC105378948 LOC107985728 AGRN ISG15 PLEKHN1 HES4 SAMD11 LOC100130417 LOC100288175 RNF223 KLHL17 C1orf159
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC284600 LOC107985729 CDK11B FAM132A WASH7P PRKCZ LINC01342 LOC100133331 ANKRD65 MIR429 LOC100506504 MIR200B MIR6727 RNF223 SLC35E2 LOC100129534 LINC00115 ACAP3 AGRN FAM41C LOC107984841 GNB1 LOC148413 MIR1302-2 NOC2L LOC101928626 LOC105378949 PLEKHN1 DVL1 TAS1R3 MORN1 MXRA8 LINC01128 LOC105378592 OR4F16 TMEM88B VWA1 CPTP PERM1 FAAP20 MRPL20 SDF4 LOC105378591 LOC100287934 FNDC10 UBE2J2 LOC100134822 TNFRSF18 TTLL10-AS1 MIR6859-2 MTND2P28 MIR6726 LOC102724312 GABRD LOC102725121 MTND1P23 LOC105378589 LOC100130417 DDX11L1 MMP23B AURKAIP1 SAMD11 TMEM240 ATAD3B MIR6723 SSU72 KLHL17 MIR6808 TMEM52 CFAP74 FAM138A SLC35E2B SKI LOC105378948 TTLL10 CALML6 ATAD3C MMP23A NADK CDK11A LOC105378947 ATAD3A LOC100132287 MIB2 TNFRSF4 OR4F5 LOC729737 MIR6859-1 LOC107985728 ISG15 LOC100288069 HES4 B3GALT6 CCNL2 PUSL1 LOC100288175 C1orf159 MIR200A OR4F29 FAM87B SCNN1D CPSF3L
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion LOC284600 NOC2L PERM1 LOC105378948 LOC107985728 AGRN ISG15 PLEKHN1 HES4 SAMD11 LOC100130417 LOC100288175 RNF223 KLHL17 C1orf159
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion LOC284600 LOC100130417 NOC2L PERM1 KLHL17 LOC107985728 PLEKHN1 SAMD11
dgv8n54 Chr.1:925754 - 943937 on Build GRCh38 Loss SAMD11
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain LOC284600 TTLL10-AS1 NOC2L LOC105378948 LINC01342 MIR429 PLEKHN1 TTLL10 MIR200B LOC100130417 RNF223 TNFRSF4 PERM1 LOC107985728 AGRN ISG15 SDF4 HES4 SAMD11 FAM41C LOC100288175 KLHL17 C1orf159 MIR200A TNFRSF18
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain LOC284600 MTND2P28 NOC2L LOC101928626 LOC105378948 LOC100133331 PLEKHN1 MTND1P23 LOC100130417 RNF223 LINC01128 LOC105378947 LINC00115 OR4F16 PERM1 LOC107985728 AGRN ISG15 LOC100288069 HES4 SAMD11 FAM41C LOC100287934 LOC100288175 MIR6723 KLHL17 LOC107984841 C1orf159 FAM87B
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC284600 LOC107985729 CDK11B TTLL10-AS1 FAM132A MIR6726 LINC01342 ANKRD65 LOC102724312 MIR429 MIR200B LOC100130417 MIR6727 RNF223 SLC35E2 LINC00115 ACAP3 MMP23B AURKAIP1 AGRN SAMD11 FAM41C TMEM240 ATAD3B SSU72 KLHL17 MIR6808 LOC148413 SLC35E2B NOC2L LOC105378948 PLEKHN1 DVL1 TAS1R3 TTLL10 MXRA8 ATAD3C LINC01128 MMP23A NADK CDK11A ATAD3A TMEM88B MIB2 TNFRSF4 VWA1 CPTP PERM1 LOC107985728 ISG15 MRPL20 LOC100288069 SDF4 HES4 B3GALT6 CCNL2 PUSL1 LOC100287934 LOC100288175 FNDC10 UBE2J2 C1orf159 MIR200A FAM87B SCNN1D TNFRSF18 CPSF3L
dgv1n111 Chr.1:690090 - 939522 on Build GRCh38 Duplication LOC284600 LOC100133331 LOC107985728 LOC100288069 SAMD11 FAM41C LOC100130417 LOC100287934 LINC01128 LOC107984841 FAM87B LINC00115 OR4F16
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss LOC284600 TTLL10-AS1 FAM132A NOC2L LOC105378948 LINC01342 MIR429 PLEKHN1 TTLL10 MIR200B LOC100130417 RNF223 LINC01128 LINC00115 TNFRSF4 PERM1 LOC107985728 AGRN ISG15 SDF4 HES4 SAMD11 B3GALT6 FAM41C LOC100288175 KLHL17 UBE2J2 C1orf159 MIR200A FAM87B TNFRSF18
dgv3n111 Chr.1:783283 - 939522 on Build GRCh38 Duplication LOC284600 FAM41C LOC100130417 LOC100287934 LINC01128 LOC107985728 FAM87B LINC00115 SAMD11
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain LOC284600 TTLL10-AS1 FAM132A NOC2L MIR6726 LOC105378948 LINC01342 ANKRD65 MIR429 PLEKHN1 DVL1 TAS1R3 TTLL10 MIR200B LOC100130417 MXRA8 MIR6727 RNF223 ACAP3 TMEM88B AURKAIP1 TNFRSF4 CPTP PERM1 LOC107985728 AGRN ISG15 MRPL20 SDF4 HES4 SAMD11 B3GALT6 CCNL2 PUSL1 LOC100288175 KLHL17 UBE2J2 C1orf159 MIR200A MIR6808 SCNN1D TNFRSF18 LOC148413 CPSF3L
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss LOC284600 LOC100130417 NOC2L PERM1 KLHL17 LOC107985728 AGRN ISG15 PLEKHN1 HES4 SAMD11
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain LOC284600 FAM41C LOC100130417 NOC2L PERM1 LINC01128 KLHL17 LOC107985728 PLEKHN1 HES4 SAMD11
nsv544898 Chr.1:924665 - 943937 on Build GRCh38 Gain LOC107985728 SAMD11

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:


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