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See other ADIRF CNV Assays ›
Gene Symbol
ADIRF
Assay Reference Genome
Location

Chr.10:86970822 on build GRCh38
Cytoband
10q23.2
Assay ID Hs02521464_cn
Size
Availability Made To Order
Catalog # 4400291
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

10974

Gene Name:

adipogenesis regulatory factor

Gene Aliases:

AFRO, APM2, C10orf116, apM-2

Location:

Chr.10:86968431-86970909 on Build GRCh38

Assay Gene Location:

Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ADIRF NM_006829.2 3 585 NP_006820.1
BM850559.1
CD722742.1 1 195

Target Gene Details

Entrez Gene ID:

119385

Gene Name:

ArfGAP with GTPase domain, ankyrin repeat and PH domain 11

Gene Aliases:

-

Location:

Chr.10:86970741-87010203 on Build GRCh38

Assay Gene Location:

Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AGAP11 NM_133447.1 1 82 NP_597704.1
AK097165.1 1 82

Target Gene Details

Entrez Gene ID:

79812

Gene Name:

multimerin 2

Gene Aliases:

EMILIN-3, EMILIN3, ENDOGLYX-1

Location:

Chr.10:86935540-86971311 on Build GRCh38

Assay Gene Location:

Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MMRN2 XM_006717970.3 1 490 XP_006718033.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv428236 Chr.10:86866859 - 87550005 on Build GRCh38 Loss NUTM2A FAM25A NUTM2D SNCG ADIRF AGAP11 BMPR1A FAM35A MINPP1 LINC00864 MIR4678 NUTM2A-AS1 GLUD1 LINC00863 MMRN2
nsv517487 Chr.10:86899290 - 86973435 on Build GRCh38 Gain+Loss SNCG ADIRF AGAP11 BMPR1A MMRN2
esv2759774 Chr.10:86755301 - 87550005 on Build GRCh38 Gain+Loss NUTM2A FAM25A NUTM2D SNCG ADIRF AGAP11 BMPR1A FAM35A MINPP1 LINC00864 MIR4678 NUTM2A-AS1 GLUD1 LINC00863 MMRN2
nsv470969 Chr.10:86936624 - 86972907 on Build GRCh38 Loss SNCG ADIRF AGAP11 MMRN2

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More Information


Additional Information:

For this assay, SNP(s) [rs73334941] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)

transcription, DNA-templated
cell differentiation
positive regulation of fat cell differentiation
positive regulation of transcription from RNA polymerase II promoter
cellular response to radiation
cellular response to cisplatin
regulation of response to drug
positive regulation of GTPase activity
angiogenesis
negative regulation of vascular endothelial growth factor receptor signaling pathway
negative regulation of cell migration involved in sprouting angiogenesis
molecular_function
GTPase activator activity
metal ion binding
protein binding

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