Hs02541883_cn

• Gene Symbol: VTI1A
• Assay Reference Genome Location: Chr.10:112447436 on build GRCh38
• Cytoband: 10q25.2

Target Gene Details

• Entrez Gene ID: 143187
• Gene Name: vesicle transport through interaction with t-SNAREs 1A
• Gene Aliases: MMDS3, MVti1, VTI1RP2, Vti1-rp2
• Location: Chr.10:112446988-112947204 on Build GRCh38
• Assay Gene Location: Overlaps Exon 1 - Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
VTI1A	NM_001318203.1			NP_001305132.1
	NM_001318205.1			NP_001305134.1
	NM_145206.3			NP_660207.2
	NR_134521.1
	NR_134522.1
	NR_134523.1
	XM_005269544.4			XP_005269601.1
	XM_005269545.4			XP_005269602.1
	XM_005269546.3			XP_005269603.1
	XM_005269547.4			XP_005269604.1
	XM_006717637.2			XP_006717700.1
	XM_011539328.2			XP_011537630.1
	XM_011539330.2			XP_011537632.1
	XM_011539331.2			XP_011537633.1
	XM_011539333.2			XP_011537635.1
	XM_017015745.1			XP_016871234.1
	XM_017015746.1			XP_016871235.1
	XM_017015747.1			XP_016871236.1
	XM_017015748.1			XP_016871237.1
	AK095476.1
	AK303646.1
	BC017052.1			AAH17052.1
	BI909044.1
	DA324398.1
	DA349859.1
	DA472521.1
	DB105695.1

Target Gene Details

• Entrez Gene ID: 64429
• Gene Name: zinc finger DHHC-type containing 6
• Gene Aliases: DHHC-6, ZNF376
• Location: Chr.10:112424411-112448335 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ZDHHC6	XM_005270051.4	1	900	XP_005270108.1
	XM_017016565.1	1	137	XP_016872054.1
	AK308026.1	1	113

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv831990	Chr.10:112349267 - 112531997 on Build GRCh38	Loss	ACSL5 ZDHHC6 VTI1A GUCY2GP
nsv831991	Chr.10:112413098 - 112582139 on Build GRCh38	Loss	ACSL5 ZDHHC6 VTI1A

More Information

• Set Membership: Intragenic, Exonic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

SNARE protein

Gene Ontology Categories:

Process(es)

protein targeting to vacuole
ER to Golgi vesicle-mediated transport
intra-Golgi vesicle-mediated transport
Golgi to vacuole transport
autophagy
retrograde transport, endosome to Golgi
vesicle fusion with Golgi apparatus
voluntary musculoskeletal movement
Golgi ribbon formation
protein palmitoylation

Function(s)

SNARE binding
SNAP receptor activity
protein binding
zinc ion binding
palmitoyltransferase activity
protein-cysteine S-palmitoyltransferase activity