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See other CLP1 CNV Assays ›
Gene Symbol
CLP1
Assay Reference Genome
Location

Chr.11:57657814 on build GRCh38
Cytoband
11q12.1
Assay ID Hs02679311_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

10978

Gene Name:

cleavage and polyadenylation factor I subunit 1

Gene Aliases:

HEAB, hClp1

Location:

Chr.11:57657744-57661865 on Build GRCh38

Assay Gene Location:

Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CLP1 NM_001142597.1 1 71 NP_001136069.1
NM_006831.2 1 71 NP_006822.1
AK300232.1 1 54
AK313007.1 1 56
BC000446.1 1 59 AAH00446.1
DA922553.1 1 71
U73524.1 1 657 AAC50780.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv832163 Chr.11:57531881 - 57713578 on Build GRCh38 Gain MIR130A CLP1 UBE2L6 SERPING1 TMX2 MED19 YPEL4 SMTNL1 TMX2-CTNND1 ZDHHC5
nsv508633 Chr.11:57652112 - 57792573 on Build GRCh38 Deletion C11orf31 CLP1 TMX2 MED19 CTNND1 TMX2-CTNND1 BTBD18 ZDHHC5
nsv832164 Chr.11:57640144 - 57811353 on Build GRCh38 Loss C11orf31 MIR130A CLP1 TMX2 MED19 YPEL4 CTNND1 TMX2-CTNND1 BTBD18 ZDHHC5

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More Information


Set Membership:

Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

mRNA polyadenylation factor

Gene Ontology Categories:

Function(s) Process(es)

mRNA splicing, via spliceosome
termination of RNA polymerase II transcription
mRNA polyadenylation
mRNA cleavage
tRNA splicing, via endonucleolytic cleavage and ligation
phosphorylation
cerebellar cortex development
targeting of mRNA for destruction involved in RNA interference
mRNA 3'-end processing
siRNA loading onto RISC involved in RNA interference
ATP binding
ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity
polydeoxyribonucleotide kinase activity
ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity

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