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Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147187053 on build GRCh38
Cytoband
1q21.1
Assay ID Hs02690107_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 7 1705 NP_001138302.1
NM_001461.3 9 1838 NP_001452.2
XM_005272946.4 9 1812 XP_005273003.1
XM_005272947.4 9 1556 XP_005273004.1
XM_005272948.4 9 1539 XP_005273005.1
XM_006711245.3 8 1475 XP_006711308.1
XM_011509350.2 9 1843 XP_011507652.1
XM_011509351.2 8 1575 XP_011507653.1
XM_017000801.1 8 1587 XP_016856290.1
XM_017000802.1 8 1357 XP_016856291.1
AK222728.1 9 1553 BAD96448.1
AK225739.1
AK314647.1 9 1766
BC035687.1 7 1378 AAH35687.1
L37080.1 9 1524 AAA67849.1
Z47553.1 9 1530 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain MIR5087 CH17-408M7.1 LOC105371242 GPR89B NBPF11 NUDT4P1 RNVU1-7 FMO5 NUDT4P2 MIR6077 LOC101927468 NBPF13P RNVU1-6 LOC100996517 CHD1L GJA5 LOC728989 RNVU1-3 PDE4DIP BCL9 LOC101928979 RNVU1-8 LOC100132057 ACP6 NBPF10 PDZK1P1 LINC01138 NBPF12 RNVU1-1 LOC100505824 RNU1-13P LOC105371226 LINC00624 PDIA3P1 LOC100996763 PPIAL4G HYDIN2 LOC284561 PRKAB2 GJA8 NBPF14 NOTCH2NL
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss MIR5087 RNF115 ANKRD35 CH17-408M7.1 LOC105371242 PDZK1 GPR89B PIAS3 FMO5 NUDT4P2 MIR6077 RNVU1-6 LOC101928979 ACP6 PDZK1P1 NBPF12 RNVU1-1 RNU1-13P LOC105371226 NUDT17 LOC100996763 ANKRD34A RBM8A GNRHR2 LOC284561 PRKAB2 GJA8 POLR3GL MIR6736 GPR89A LIX1L NBPF11 NUDT4P1 RNVU1-7 CD160 LOC101927468 NBPF13P LOC100996517 TXNIP CHD1L GJA5 LOC728989 POLR3C RNVU1-3 PDE4DIP BCL9 RNVU1-8 LOC100132057 NBPF10 LINC01138 LOC100505824 LINC00624 PDIA3P1 PPIAL4G HYDIN2 NBPF14 NOTCH2NL PEX11B HFE2 ITGA10
nsv1121713 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion NBPF13P CHD1L PRKAB2 LOC728989 FMO5 RNVU1-8 PDIA3P1
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss MIR5087 CH17-408M7.1 LOC105371242 GPR89B NBPF11 NUDT4P1 RNVU1-7 FMO5 NUDT4P2 MIR6077 LOC101927468 NBPF13P LOC100996517 CHD1L GJA5 LOC728989 RNVU1-3 PDE4DIP BCL9 RNVU1-8 LOC100132057 ACP6 NBPF10 PDZK1P1 LINC01138 NBPF12 RNVU1-1 LOC100505824 RNU1-13P LOC105371226 LINC00624 PDIA3P1 LOC100996763 PPIAL4G HYDIN2 LOC284561 PRKAB2 GJA8 NBPF14 NOTCH2NL
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion MIR5087 CH17-408M7.1 LOC105371242 LIX1L GPR89B NBPF11 NUDT4P1 RNVU1-7 FMO5 NUDT4P2 MIR6077 LOC101927468 NBPF13P RNVU1-6 LOC100996517 TXNIP CHD1L GJA5 LOC728989 RNVU1-3 PDE4DIP BCL9 LOC101928979 RNVU1-8 LOC100132057 ACP6 NBPF10 PDZK1P1 LINC01138 NBPF12 RNVU1-1 LOC100505824 RNU1-13P LOC105371226 LINC00624 PDIA3P1 LOC100996763 PPIAL4G ANKRD34A HYDIN2 LOC284561 PRKAB2 GJA8 NBPF14 NOTCH2NL HFE2 POLR3GL
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication MIR5087 CH17-408M7.1 LOC105371242 GPR89B NBPF11 NUDT4P1 RNVU1-7 FMO5 NUDT4P2 MIR6077 LOC101927468 NBPF13P LOC100996517 CHD1L GJA5 LOC728989 RNVU1-3 PDE4DIP BCL9 RNVU1-8 LOC100132057 ACP6 PDZK1P1 LINC01138 NBPF12 RNVU1-1 LOC100505824 RNU1-13P LOC105371226 LINC00624 PDIA3P1 LOC100996763 PPIAL4G HYDIN2 LOC284561 PRKAB2 GJA8 NBPF14 NOTCH2NL
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain MIR5087 CH17-408M7.1 LOC105371242 GPR89B NBPF11 NUDT4P1 RNVU1-7 FMO5 NUDT4P2 MIR6077 LOC101927468 NBPF13P RNVU1-6 LOC100996517 CHD1L GJA5 LOC728989 RNVU1-3 PDE4DIP BCL9 LOC101928979 RNVU1-8 LOC100132057 ACP6 NBPF10 PDZK1P1 LINC01138 NBPF12 RNVU1-1 LOC100505824 RNU1-13P LOC105371226 LINC00624 PDIA3P1 LOC100996763 PPIAL4G HYDIN2 LOC284561 PRKAB2 GJA8 NBPF14 NOTCH2NL
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion MIR5087 NBPF9 CH17-408M7.1 LOC105371242 GPR89B NBPF11 NUDT4P1 RNVU1-7 FMO5 NUDT4P2 MIR6077 LOC101927468 NBPF13P LOC100996517 CHD1L GJA5 LOC728989 RNVU1-3 PDE4DIP BCL9 LOC101928979 RNVU1-8 LOC100132057 ACP6 NBPF10 PDZK1P1 LINC01138 NBPF12 RNVU1-1 LOC100505824 RNU1-13P LOC105371226 LINC00624 PDIA3P1 LOC100996763 PPIAL4G HYDIN2 LOC284561 PRKAB2 GJA8 NBPF14 NOTCH2NL
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss CHD1L PRKAB2 FMO5 PDIA3P1

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