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Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147201312 on build GRCh38
Cytoband
1q21.1
Assay ID Hs02744463_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 7 1422 NP_001138301.1
NM_001144830.2 NP_001138302.1
NM_001461.3 7 1412 NP_001452.2
XM_005272946.4 7 1386 XP_005273003.1
XM_005272947.4 7 1130 XP_005273004.1
XM_005272948.4 7 1113 XP_005273005.1
XM_006711245.3 XP_006711308.1
XM_011509350.2 7 1417 XP_011507652.1
XM_011509351.2 6 1149 XP_011507653.1
XM_017000801.1 6 1161 XP_016856290.1
XM_017000802.1 6 931 XP_016856291.1
AK222728.1 7 1127 BAD96448.1
AK225739.1 7 1137
AK314647.1 7 1340
BC035687.1 AAH35687.1
L37080.1 7 1098 AAA67849.1
Z47553.1 7 1104 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain LINC01138 RNU1-13P LOC728989 PDE4DIP LINC00624 PDZK1P1 LOC105371226 LOC100132057 NBPF10 RNVU1-7 MIR6077 LOC101928979 LOC100505824 NBPF14 MIR5087 PDIA3P1 LOC101927468 NUDT4P2 ACP6 BCL9 CHD1L LOC105371242 PPIAL4G PRKAB2 RNVU1-6 RNVU1-8 NUDT4P1 NBPF13P CH17-408M7.1 FMO5 NBPF11 GPR89B NBPF12 RNVU1-3 RNVU1-1 GJA8 NOTCH2NL LOC100996763 HYDIN2 GJA5 LOC100996517 LOC284561
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss LINC01138 LOC728989 PDE4DIP LOC105371226 LOC100132057 NUDT17 LOC101928979 NBPF14 TXNIP MIR5087 PDIA3P1 GNRHR2 LOC105371242 PPIAL4G PRKAB2 ANKRD35 NUDT4P1 NBPF13P NBPF11 GPR89B NBPF12 MIR6736 RNVU1-1 PIAS3 LOC100996763 LOC284561 RNU1-13P CD160 LINC00624 PDZK1P1 NBPF10 RNVU1-7 HFE2 PDZK1 MIR6077 GPR89A LOC100505824 RNF115 ITGA10 LOC101927468 NUDT4P2 ACP6 BCL9 LIX1L CHD1L RNVU1-6 RNVU1-8 POLR3C PEX11B CH17-408M7.1 POLR3GL FMO5 RNVU1-3 ANKRD34A GJA8 NOTCH2NL HYDIN2 GJA5 LOC100996517 RBM8A
nsv1121713 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion LOC728989 FMO5 CHD1L PRKAB2 PDIA3P1 RNVU1-8 NBPF13P
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss LINC01138 RNU1-13P LOC728989 PDE4DIP LINC00624 PDZK1P1 LOC105371226 LOC100132057 NBPF10 RNVU1-7 MIR6077 LOC100505824 NBPF14 MIR5087 PDIA3P1 LOC101927468 NUDT4P2 ACP6 BCL9 CHD1L LOC105371242 PPIAL4G PRKAB2 RNVU1-8 NUDT4P1 NBPF13P CH17-408M7.1 FMO5 NBPF11 GPR89B NBPF12 RNVU1-3 RNVU1-1 GJA8 NOTCH2NL LOC100996763 HYDIN2 GJA5 LOC100996517 LOC284561
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion LINC01138 RNU1-13P LOC728989 PDE4DIP LINC00624 PDZK1P1 LOC105371226 LOC100132057 NBPF10 RNVU1-7 HFE2 MIR6077 LOC101928979 LOC100505824 NBPF14 TXNIP MIR5087 PDIA3P1 LOC101927468 NUDT4P2 ACP6 BCL9 LIX1L CHD1L LOC105371242 PPIAL4G PRKAB2 RNVU1-6 RNVU1-8 NUDT4P1 NBPF13P CH17-408M7.1 POLR3GL FMO5 NBPF11 GPR89B NBPF12 RNVU1-3 RNVU1-1 ANKRD34A GJA8 NOTCH2NL LOC100996763 HYDIN2 GJA5 LOC100996517 LOC284561
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication LINC01138 RNU1-13P LOC728989 PDE4DIP LINC00624 PDZK1P1 LOC105371226 LOC100132057 RNVU1-7 MIR6077 LOC100505824 NBPF14 MIR5087 PDIA3P1 LOC101927468 NUDT4P2 ACP6 BCL9 CHD1L LOC105371242 PPIAL4G PRKAB2 RNVU1-8 NUDT4P1 NBPF13P CH17-408M7.1 FMO5 NBPF11 GPR89B NBPF12 RNVU1-3 RNVU1-1 GJA8 NOTCH2NL LOC100996763 HYDIN2 GJA5 LOC100996517 LOC284561
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain LINC01138 RNU1-13P LOC728989 PDE4DIP LINC00624 PDZK1P1 LOC105371226 LOC100132057 NBPF10 RNVU1-7 MIR6077 LOC101928979 LOC100505824 NBPF14 MIR5087 PDIA3P1 LOC101927468 NUDT4P2 ACP6 BCL9 CHD1L LOC105371242 PPIAL4G PRKAB2 RNVU1-6 RNVU1-8 NUDT4P1 NBPF13P CH17-408M7.1 FMO5 NBPF11 GPR89B NBPF12 RNVU1-3 RNVU1-1 GJA8 NOTCH2NL LOC100996763 HYDIN2 GJA5 LOC100996517 LOC284561
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion LINC01138 RNU1-13P LOC728989 PDE4DIP LINC00624 PDZK1P1 LOC105371226 LOC100132057 NBPF10 RNVU1-7 MIR6077 LOC101928979 LOC100505824 NBPF9 NBPF14 MIR5087 PDIA3P1 LOC101927468 NUDT4P2 ACP6 BCL9 CHD1L LOC105371242 PPIAL4G PRKAB2 RNVU1-8 NUDT4P1 NBPF13P CH17-408M7.1 FMO5 NBPF11 GPR89B NBPF12 RNVU1-3 RNVU1-1 GJA8 NOTCH2NL LOC100996763 HYDIN2 GJA5 LOC100996517 LOC284561
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss FMO5 CHD1L PRKAB2 PDIA3P1

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