Genomic Map
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Target Gene Details
Entrez Gene ID: | 148398 |
Gene Name: | sterile alpha motif domain containing 11 |
Gene Aliases: |
MRS |
Location: |
Chr.1:925741-944581 on Build GRCh38 |
Assay Gene Location: | Overlaps Exon 6 - Intron 6 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SAMD11 | NM_152486.2 | NP_689699.2 | ||
| BC024295.2 | AAH24295.1 | |||
| CN293867.1 | ||||
| CN342795.1 | ||||
| JX093066.1 | ||||
| JX093067.1 | ||||
| JX093068.1 | ||||
| JX093069.1 | ||||
| JX093070.1 | ||||
| JX093071.1 | ||||
| JX093072.1 | ||||
| JX093073.1 | ||||
| JX093074.1 | ||||
| JX093075.1 | ||||
| JX093076.1 | ||||
| JX093077.1 | ||||
| JX093078.1 | ||||
| JX093079.1 | ||||
| JX093080.1 | ||||
| JX093081.1 | ||||
| JX093082.1 | ||||
| JX093083.1 | ||||
| JX093084.1 | ||||
| JX093085.1 | ||||
| JX093086.1 | ||||
| JX093087.1 | ||||
| JX093088.1 | ||||
| JX093089.1 | ||||
| JX093090.1 | ||||
| JX093091.1 | ||||
| JX093092.1 | ||||
| JX093093.1 | ||||
| JX093094.1 | ||||
| JX093095.1 | ||||
| JX093096.1 | ||||
| JX093097.1 | ||||
| JX093098.1 | ||||
| JX093099.1 | ||||
| JX093100.1 | ||||
| JX093101.1 | ||||
| JX093102.1 | ||||
| JX093103.1 | ||||
| JX093104.1 | ||||
| JX093105.1 | ||||
| JX093106.1 | ||||
| JX093107.1 | ||||
| JX093108.1 | ||||
| JX093109.1 | ||||
| JX093110.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| dgv15n54 | Chr.1:934063 - 943937 on Build GRCh38 | Loss |
 SAMD11
|
| esv2762302 | Chr.1:914637 - 1106320 on Build GRCh38 | Gain |
LOC100130417
PLEKHN1
LOC100288175
KLHL17
ISG15
C1orf159
LOC105378948
PERM1
SAMD11
LOC107985728
HES4
RNF223
NOC2L
LOC284600
AGRN
|
| nsv482937 | Chr.1:10001 - 2368561 on Build GRCh38 | Loss |
SSU72
LOC100130417
CCNL2
SLC35E2B
LOC100133331
LOC100288175
LOC105378947
ISG15
MIR200A
MIR429
PERM1
MIR6723
TNFRSF18
LOC107985728
SCNN1D
MIR1302-2
LOC100129534
AGRN
LOC100132287
MIR6859-1
TNFRSF4
SKI
OR4F16
OR4F29
LOC100288069
GNB1
SAMD11
LOC101928626
MIR200B
HES4
CDK11B
ACAP3
MTND1P23
LOC105378589
PLEKHN1
LOC100287934
TMEM52
LOC100134822
LINC00115
LOC102725121
FAM41C
CALML6
TMEM240
MMP23A
LOC107984841
DDX11L1
DVL1
LINC01342
FAM138A
GABRD
SLC35E2
CFAP74
WASH7P
ANKRD65
LOC148413
UBE2J2
VWA1
TMEM88B
MIB2
LOC102724312
LOC107985729
AURKAIP1
FAM87B
NOC2L
MXRA8
B3GALT6
CDK11A
ATAD3C
LOC100506504
MMP23B
TTLL10-AS1
FAAP20
MORN1
LINC01128
FNDC10
C1orf159
PUSL1
PRKCZ
CPSF3L
RNF223
SDF4
LOC105378592
LOC284600
MIR6859-2
TTLL10
LOC105378591
OR4F5
TAS1R3
FAM132A
ATAD3A
LOC105378949
MRPL20
NADK
MTND2P28
MIR6727
CPTP
LOC729737
KLHL17
MIR6726
LOC105378948
ATAD3B
MIR6808
|
| nsv950451 | Chr.1:899421 - 1094520 on Build GRCh38 | Deletion |
LOC100130417
PLEKHN1
LOC100288175
KLHL17
ISG15
C1orf159
LOC105378948
PERM1
SAMD11
LOC107985728
HES4
RNF223
NOC2L
LOC284600
AGRN
|
| nsv509035 | Chr.1:891406 - 985724 on Build GRCh38 | Insertion |
LOC100130417
PERM1
SAMD11
PLEKHN1
LOC107985728
NOC2L
LOC284600
KLHL17
|
| dgv8n54 | Chr.1:925754 - 943937 on Build GRCh38 | Loss |
SAMD11
|
| nsv428334 | Chr.1:874371 - 1220569 on Build GRCh38 | Gain |
TTLL10
LOC100130417
PLEKHN1
LOC100288175
ISG15
MIR200A
MIR429
PERM1
TNFRSF18
LOC107985728
NOC2L
FAM41C
AGRN
TTLL10-AS1
TNFRSF4
KLHL17
LINC01342
C1orf159
LOC105378948
SAMD11
MIR200B
HES4
RNF223
SDF4
LOC284600
|
| dgv5n100 | Chr.1:585989 - 1114424 on Build GRCh38 | Gain |
LOC100130417
PLEKHN1
LOC100133331
LOC100288175
LOC105378947
ISG15
LOC100287934
PERM1
MIR6723
LINC00115
LOC107985728
FAM87B
NOC2L
FAM41C
AGRN
MTND2P28
OR4F16
LOC107984841
LINC01128
KLHL17
LOC100288069
C1orf159
LOC105378948
SAMD11
LOC101928626
HES4
RNF223
LOC284600
MTND1P23
|
| nsv10161 | Chr.1:776731 - 1777210 on Build GRCh38 | Gain+Loss |
SSU72
LOC100130417
CCNL2
ANKRD65
LOC148413
SLC35E2B
LOC100288175
UBE2J2
ISG15
VWA1
MIR200A
MIR429
TMEM88B
MIB2
LOC102724312
PERM1
LOC107985729
TNFRSF18
LOC107985728
SCNN1D
AURKAIP1
FAM87B
NOC2L
MXRA8
B3GALT6
CDK11A
AGRN
ATAD3C
MMP23B
TTLL10-AS1
TNFRSF4
LINC01128
FNDC10
LOC100288069
C1orf159
PUSL1
SAMD11
MIR200B
CPSF3L
HES4
RNF223
SDF4
CDK11B
LOC284600
ACAP3
TTLL10
PLEKHN1
TAS1R3
FAM132A
ATAD3A
LOC100287934
MRPL20
NADK
LINC00115
FAM41C
TMEM240
MIR6727
MMP23A
CPTP
DVL1
KLHL17
MIR6726
LINC01342
LOC105378948
ATAD3B
SLC35E2
MIR6808
|
| dgv1n111 | Chr.1:690090 - 939522 on Build GRCh38 | Duplication |
LOC100130417
OR4F16
LOC100133331
LOC107984841
LINC01128
LOC100288069
LOC100287934
SAMD11
LINC00115
LOC107985728
FAM87B
LOC284600
FAM41C
|
| nsv517709 | Chr.1:817186 - 1275912 on Build GRCh38 | Gain+Loss |
TTLL10
LOC100130417
PLEKHN1
LOC100288175
UBE2J2
ISG15
MIR200A
FAM132A
MIR429
PERM1
TNFRSF18
LINC00115
LOC107985728
FAM87B
NOC2L
FAM41C
B3GALT6
AGRN
TTLL10-AS1
TNFRSF4
LINC01128
KLHL17
LINC01342
C1orf159
LOC105378948
SAMD11
MIR200B
HES4
RNF223
SDF4
LOC284600
|
| dgv3n111 | Chr.1:783283 - 939522 on Build GRCh38 | Duplication |
LOC100130417
LOC100287934
SAMD11
LINC00115
LINC01128
LOC107985728
FAM87B
LOC284600
FAM41C
|
| dgv2n67 | Chr.1:877618 - 1426500 on Build GRCh38 | Gain |
TTLL10
LOC100130417
CCNL2
ANKRD65
LOC148413
PLEKHN1
LOC100288175
UBE2J2
ISG15
MIR200A
TAS1R3
FAM132A
MIR429
TMEM88B
MRPL20
PERM1
TNFRSF18
LOC107985728
SCNN1D
AURKAIP1
NOC2L
MXRA8
B3GALT6
AGRN
MIR6727
TTLL10-AS1
TNFRSF4
CPTP
DVL1
KLHL17
MIR6726
LINC01342
C1orf159
LOC105378948
PUSL1
SAMD11
MIR200B
MIR6808
CPSF3L
HES4
RNF223
SDF4
LOC284600
ACAP3
|
| nsv544895 | Chr.1:917392 - 1054900 on Build GRCh38 | Loss |
LOC100130417
PERM1
SAMD11
PLEKHN1
LOC107985728
HES4
NOC2L
LOC284600
KLHL17
ISG15
AGRN
|
| nsv832980 | Chr.1:848279 - 1007037 on Build GRCh38 | Gain |
LOC100130417
PERM1
SAMD11
PLEKHN1
LINC01128
LOC107985728
HES4
NOC2L
LOC284600
KLHL17
FAM41C
|
| nsv544898 | Chr.1:924665 - 943937 on Build GRCh38 | Gain |
SAMD11
LOC107985728
|
Back To TopMore Information
Set Membership: |
Intragenic
Non-exonic
DGV Variation
|
Panther Classification:
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