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Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147186291 on build GRCh38
Cytoband
1q21.1
Assay ID Hs02969677_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 NP_001138302.1
NM_001461.3 NP_001452.2
XM_005272946.4 9 2574 XP_005273003.1
XM_005272947.4 9 2318 XP_005273004.1
XM_005272948.4 9 2301 XP_005273005.1
XM_006711245.3 8 2237 XP_006711308.1
XM_011509350.2 9 2605 XP_011507652.1
XM_011509351.2 8 2337 XP_011507653.1
XM_017000801.1 8 2349 XP_016856290.1
XM_017000802.1 8 2119 XP_016856291.1
AK222728.1 BAD96448.1
AK225739.1
BC035687.1 AAH35687.1
L37080.1 AAA67849.1
Z47553.1 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain RNVU1-3 PRKAB2 CH17-408M7.1 MIR6077 CHD1L ACP6 LOC101928979 NBPF13P LOC101927468 NBPF10 PDE4DIP PDIA3P1 LOC105371242 RNVU1-7 GJA5 LOC100996517 PPIAL4G RNVU1-8 GPR89B NUDT4P1 RNU1-13P LOC100132057 PDZK1P1 LOC284561 NUDT4P2 FMO5 RNVU1-1 HYDIN2 LOC728989 NBPF14 BCL9 MIR5087 LOC100505824 NBPF12 LOC105371226 LINC01138 NOTCH2NL LINC00624 RNVU1-6 GJA8 LOC100996763 NBPF11
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss RNVU1-3 ANKRD34A PRKAB2 ACP6 ITGA10 MIR6736 PEX11B NBPF10 POLR3C PDE4DIP PDIA3P1 LOC105371242 HFE2 RNVU1-7 PPIAL4G RNVU1-8 PDZK1 GPR89B RNU1-13P PDZK1P1 LOC284561 NUDT4P2 FMO5 RNVU1-1 HYDIN2 POLR3GL NUDT17 NBPF14 GPR89A LOC105371226 GJA8 LOC100996763 NBPF11 CH17-408M7.1 MIR6077 CHD1L LOC101928979 NBPF13P LOC101927468 PIAS3 GJA5 LOC100996517 ANKRD35 NUDT4P1 LOC100132057 GNRHR2 LIX1L LOC728989 BCL9 MIR5087 LOC100505824 NBPF12 LINC01138 NOTCH2NL CD160 TXNIP LINC00624 RNVU1-6 RNF115 RBM8A
nsv1121713 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion PRKAB2 LOC728989 CHD1L PDIA3P1 FMO5 NBPF13P RNVU1-8
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss RNVU1-3 PRKAB2 CH17-408M7.1 MIR6077 CHD1L ACP6 NBPF13P LOC101927468 NBPF10 PDE4DIP PDIA3P1 LOC105371242 RNVU1-7 GJA5 LOC100996517 PPIAL4G RNVU1-8 GPR89B NUDT4P1 RNU1-13P LOC100132057 PDZK1P1 LOC284561 NUDT4P2 FMO5 RNVU1-1 HYDIN2 LOC728989 NBPF14 BCL9 MIR5087 LOC100505824 NBPF12 LOC105371226 LINC01138 NOTCH2NL LINC00624 GJA8 LOC100996763 NBPF11
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion RNVU1-3 ANKRD34A PRKAB2 CH17-408M7.1 MIR6077 CHD1L ACP6 LOC101928979 NBPF13P LOC101927468 NBPF10 PDE4DIP PDIA3P1 LOC105371242 HFE2 RNVU1-7 GJA5 LOC100996517 PPIAL4G RNVU1-8 GPR89B NUDT4P1 RNU1-13P LOC100132057 PDZK1P1 LOC284561 NUDT4P2 FMO5 RNVU1-1 LIX1L HYDIN2 POLR3GL LOC728989 NBPF14 BCL9 MIR5087 LOC100505824 NBPF12 LOC105371226 LINC01138 NOTCH2NL TXNIP LINC00624 RNVU1-6 GJA8 LOC100996763 NBPF11
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication RNVU1-3 PRKAB2 CH17-408M7.1 MIR6077 CHD1L ACP6 NBPF13P LOC101927468 PDE4DIP PDIA3P1 LOC105371242 RNVU1-7 GJA5 LOC100996517 PPIAL4G RNVU1-8 GPR89B NUDT4P1 RNU1-13P LOC100132057 PDZK1P1 LOC284561 NUDT4P2 FMO5 RNVU1-1 HYDIN2 LOC728989 NBPF14 BCL9 MIR5087 LOC100505824 NBPF12 LOC105371226 LINC01138 NOTCH2NL LINC00624 GJA8 LOC100996763 NBPF11
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain RNVU1-3 PRKAB2 CH17-408M7.1 MIR6077 CHD1L ACP6 LOC101928979 NBPF13P LOC101927468 NBPF10 PDE4DIP PDIA3P1 LOC105371242 RNVU1-7 GJA5 LOC100996517 PPIAL4G RNVU1-8 GPR89B NUDT4P1 RNU1-13P LOC100132057 PDZK1P1 LOC284561 NUDT4P2 FMO5 RNVU1-1 HYDIN2 LOC728989 NBPF14 BCL9 MIR5087 LOC100505824 NBPF12 LOC105371226 LINC01138 NOTCH2NL LINC00624 RNVU1-6 GJA8 LOC100996763 NBPF11
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion RNVU1-3 PRKAB2 CH17-408M7.1 MIR6077 CHD1L ACP6 LOC101928979 NBPF13P LOC101927468 NBPF9 NBPF10 PDE4DIP PDIA3P1 LOC105371242 RNVU1-7 GJA5 LOC100996517 PPIAL4G RNVU1-8 GPR89B NUDT4P1 RNU1-13P LOC100132057 PDZK1P1 LOC284561 NUDT4P2 FMO5 RNVU1-1 HYDIN2 LOC728989 NBPF14 BCL9 MIR5087 LOC100505824 NBPF12 LOC105371226 LINC01138 NOTCH2NL LINC00624 GJA8 LOC100996763 NBPF11
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss PRKAB2 CHD1L PDIA3P1 FMO5

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