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Gene Symbol
TNFRSF18
Assay Reference Genome
Location

Chr.1:1203641 on build GRCh38
Cytoband
1p36.33
Assay ID Hs02978822_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8784

Gene Name:

 TNF receptor superfamily member 18

Gene Aliases:

 AITR, CD357, GITR, GITR-D

Location:

 Chr.1:1203508-1207900 on Build GRCh38

Assay Gene Location:

 Within Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TNFRSF18 NM_004195.2 5 1067 NP_004186.1
NM_148901.1 4 856 NP_683699.1
NM_148902.1 5 1046 NP_683700.1
XM_017002722.1 4 2323 XP_016858211.1
AF241229.1 4 718 AAF63506.1
AY358877.1 AAQ89236.1
KP067911.1 4 1132

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication ACAP3 MIR200A CPTP MIR200B MIR429 TNFRSF4 PUSL1 LINC01342 RNF223 SDF4 MIR6726 TTLL10 UBE2J2 CPSF3L TTLL10-AS1 MIR6727 TNFRSF18 LOC105378948 TAS1R3 FAM132A LOC100288175 AGRN C1orf159 B3GALT6 SCNN1D
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain LOC100130417 MIR200A MIR200B NOC2L MIR429 TNFRSF4 KLHL17 LINC01342 RNF223 FAM41C SDF4 TTLL10 LOC284600 TTLL10-AS1 TNFRSF18 LOC105378948 PLEKHN1 HES4 LOC100288175 PERM1 SAMD11 ISG15 AGRN C1orf159 LOC107985728
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC100130417 CCNL2 MIR200A CPTP NOC2L CDK11B ATAD3B TNFRSF4 KLHL17 AURKAIP1 LINC01342 LINC01128 FAM41C SDF4 FNDC10 MIR6726 TTLL10 CDK11A LOC284600 TTLL10-AS1 TNFRSF18 LOC105378948 TAS1R3 TMEM240 PLEKHN1 FAM132A VWA1 MMP23A NADK MXRA8 SLC35E2B HES4 LOC100288175 SSU72 ISG15 LOC100288069 AGRN C1orf159 B3GALT6 ACAP3 SLC35E2 MIR200B MIR429 MMP23B MIR6808 PUSL1 RNF223 DVL1 TMEM88B LINC00115 ATAD3A UBE2J2 CPSF3L MRPL20 MIR6727 FAM87B ANKRD65 MIB2 LOC148413 LOC100287934 PERM1 LOC107985729 LOC102724312 ATAD3C SAMD11 LOC107985728 SCNN1D
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss SKI MIR200A MORN1 CDK11B TNFRSF4 MIR1302-2 AURKAIP1 FAAP20 LINC01342 FAM41C FNDC10 LOC100506504 LOC284600 TTLL10-AS1 TNFRSF18 LOC105378948 TAS1R3 TMEM240 MIR6723 VWA1 MTND1P23 MXRA8 SLC35E2B WASH7P LOC100288069 C1orf159 OR4F29 ACAP3 DDX11L1 SLC35E2 LOC101928626 MIR200B LOC105378591 LOC107984841 LOC105378949 LOC105378592 MIR6808 LOC729737 GNB1 DVL1 TMEM88B LINC00115 CPSF3L PRKCZ MRPL20 MIR6727 CALML6 FAM87B CFAP74 ANKRD65 LOC100129534 LOC100287934 PERM1 LOC100134822 LOC107985729 SAMD11 SCNN1D MIR6859-1 LOC100130417 CCNL2 CPTP LOC100133331 NOC2L ATAD3B MIR6859-2 KLHL17 LINC01128 OR4F16 SDF4 MIR6726 TTLL10 CDK11A LOC100132287 PLEKHN1 FAM132A MTND2P28 MMP23A NADK LOC102725121 HES4 LOC100288175 SSU72 ISG15 AGRN B3GALT6 TMEM52 GABRD MIR429 OR4F5 MMP23B PUSL1 RNF223 FAM138A LOC105378947 ATAD3A UBE2J2 MIB2 LOC148413 LOC102724312 ATAD3C LOC105378589 LOC107985728
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion ACAP3 CCNL2 MIR200A CPTP MIR200B MIR429 MMP23B CDK11B MIR6808 ATAD3B TNFRSF4 AURKAIP1 PUSL1 LINC01342 DVL1 SDF4 FNDC10 TMEM88B MIR6726 TTLL10 ATAD3A UBE2J2 CPSF3L TTLL10-AS1 MRPL20 MIR6727 TNFRSF18 TAS1R3 TMEM240 FAM132A ANKRD65 VWA1 MIB2 MXRA8 LOC148413 LOC107985729 LOC102724312 ATAD3C SSU72 C1orf159 B3GALT6 SCNN1D
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss LOC100130417 MIR200A MIR200B NOC2L MIR429 TNFRSF4 KLHL17 LINC01342 LINC01128 RNF223 FAM41C SDF4 LINC00115 TTLL10 UBE2J2 LOC284600 TTLL10-AS1 TNFRSF18 LOC105378948 PLEKHN1 FAM87B FAM132A HES4 LOC100288175 PERM1 SAMD11 ISG15 AGRN C1orf159 LOC107985728 B3GALT6
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion TTLL10-AS1 TNFRSF18 MIR200A LOC105378948 MIR200B NOC2L MIR429 PLEKHN1 TNFRSF4 KLHL17 LINC01342 RNF223 SDF4 HES4 TTLL10 LOC100288175 PERM1 SAMD11 ISG15 AGRN C1orf159
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain ACAP3 LOC100130417 CCNL2 MIR200A CPTP MIR200B NOC2L MIR429 MIR6808 TNFRSF4 KLHL17 AURKAIP1 PUSL1 LINC01342 RNF223 DVL1 SDF4 TMEM88B MIR6726 TTLL10 UBE2J2 CPSF3L LOC284600 TTLL10-AS1 MRPL20 MIR6727 TNFRSF18 LOC105378948 TAS1R3 PLEKHN1 FAM132A ANKRD65 MXRA8 LOC148413 HES4 LOC100288175 PERM1 SAMD11 ISG15 AGRN C1orf159 LOC107985728 B3GALT6 SCNN1D
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain TTLL10-AS1 TNFRSF18 MIR200A LOC105378948 MIR200B MIR429 FAM132A TNFRSF4 LINC01342 RNF223 SDF4 TTLL10 UBE2J2 C1orf159 B3GALT6 SCNN1D
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss ACAP3 MIR200A CPTP MIR200B MIR429 MIR6808 TNFRSF4 AURKAIP1 PUSL1 LINC01342 RNF223 DVL1 SDF4 MIR6726 TTLL10 UBE2J2 CPSF3L TTLL10-AS1 MIR6727 TNFRSF18 TAS1R3 FAM132A MXRA8 C1orf159 B3GALT6 SCNN1D
nsv544956 Chr.1:1171093 - 1241217 on Build GRCh38 Loss TTLL10-AS1 TNFRSF18 SDF4 TTLL10 TNFRSF4 B3GALT6
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain TTLL10-AS1 MIR6727 TNFRSF18 ACAP3 MIR200A MIR200B MIR429 FAM132A TNFRSF4 PUSL1 SDF4 MIR6726 TTLL10 UBE2J2 CPSF3L B3GALT6 SCNN1D

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