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Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147186888 on build GRCh38
Cytoband
1q21.1
Assay ID Hs03018247_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 7 1870 NP_001138302.1
NM_001461.3 9 2003 NP_001452.2
XM_005272946.4 9 1977 XP_005273003.1
XM_005272947.4 9 1721 XP_005273004.1
XM_005272948.4 9 1704 XP_005273005.1
XM_006711245.3 8 1640 XP_006711308.1
XM_011509350.2 9 2008 XP_011507652.1
XM_011509351.2 8 1740 XP_011507653.1
XM_017000801.1 8 1752 XP_016856290.1
XM_017000802.1 8 1522 XP_016856291.1
AK222728.1 9 1718 BAD96448.1
AK225739.1
AK314647.1
BC035687.1 7 1543 AAH35687.1
L37080.1 9 1689 AAA67849.1
Z47553.1 9 1695 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain RNVU1-3 LOC100996763 PPIAL4G NBPF11 LOC101927468 NBPF14 LOC101928979 LOC100996517 RNVU1-7 LOC105371242 NBPF12 RNVU1-8 PDZK1P1 PDIA3P1 ACP6 NOTCH2NL LOC284561 PDE4DIP LOC105371226 LINC00624 MIR5087 HYDIN2 LOC100132057 GJA8 FMO5 LOC728989 NBPF13P GPR89B GJA5 RNU1-13P PRKAB2 LOC100505824 LINC01138 CH17-408M7.1 RNVU1-1 NUDT4P2 BCL9 CHD1L MIR6077 RNVU1-6 NUDT4P1 NBPF10
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss RNF115 RNVU1-3 LOC101927468 LOC101928979 LOC100996517 RNVU1-7 LOC105371242 NBPF12 PDZK1P1 PDIA3P1 PDE4DIP GNRHR2 LOC105371226 NUDT17 LINC00624 HYDIN2 ANKRD35 LOC728989 NBPF13P GPR89B GJA5 RNU1-13P PRKAB2 CH17-408M7.1 RNVU1-1 CD160 LIX1L RBM8A PIAS3 BCL9 RNVU1-6 NUDT4P1 LOC100996763 PPIAL4G NBPF11 NBPF14 PEX11B ITGA10 POLR3GL RNVU1-8 ACP6 POLR3C NOTCH2NL PDZK1 LOC284561 MIR6736 TXNIP MIR5087 LOC100132057 GJA8 FMO5 LOC100505824 HFE2 LINC01138 GPR89A NUDT4P2 CHD1L MIR6077 ANKRD34A NBPF10
nsv1121713 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion PDIA3P1 FMO5 LOC728989 NBPF13P PRKAB2 CHD1L RNVU1-8
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss RNVU1-3 LOC100996763 PPIAL4G NBPF11 LOC101927468 NBPF14 LOC100996517 RNVU1-7 LOC105371242 NBPF12 RNVU1-8 PDZK1P1 PDIA3P1 ACP6 NOTCH2NL LOC284561 PDE4DIP LOC105371226 LINC00624 MIR5087 HYDIN2 LOC100132057 GJA8 FMO5 LOC728989 NBPF13P GPR89B GJA5 RNU1-13P PRKAB2 LOC100505824 LINC01138 CH17-408M7.1 RNVU1-1 NUDT4P2 BCL9 CHD1L MIR6077 NUDT4P1 NBPF10
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion RNVU1-3 LOC100996763 PPIAL4G NBPF11 LOC101927468 NBPF14 LOC101928979 LOC100996517 RNVU1-7 POLR3GL LOC105371242 NBPF12 RNVU1-8 PDZK1P1 PDIA3P1 ACP6 NOTCH2NL LOC284561 PDE4DIP LOC105371226 TXNIP LINC00624 MIR5087 HYDIN2 LOC100132057 GJA8 FMO5 LOC728989 NBPF13P GPR89B GJA5 RNU1-13P PRKAB2 LOC100505824 HFE2 LINC01138 CH17-408M7.1 RNVU1-1 LIX1L NUDT4P2 BCL9 CHD1L MIR6077 ANKRD34A RNVU1-6 NUDT4P1 NBPF10
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication RNVU1-3 LOC100996763 PPIAL4G NBPF11 LOC101927468 NBPF14 LOC100996517 RNVU1-7 LOC105371242 NBPF12 RNVU1-8 PDZK1P1 PDIA3P1 ACP6 NOTCH2NL LOC284561 PDE4DIP LOC105371226 LINC00624 MIR5087 HYDIN2 LOC100132057 GJA8 FMO5 LOC728989 NBPF13P GPR89B GJA5 RNU1-13P PRKAB2 LOC100505824 LINC01138 CH17-408M7.1 RNVU1-1 NUDT4P2 BCL9 CHD1L MIR6077 NUDT4P1
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain RNVU1-3 LOC100996763 PPIAL4G NBPF11 LOC101927468 NBPF14 LOC101928979 LOC100996517 RNVU1-7 LOC105371242 NBPF12 RNVU1-8 PDZK1P1 PDIA3P1 ACP6 NOTCH2NL LOC284561 PDE4DIP LOC105371226 LINC00624 MIR5087 HYDIN2 LOC100132057 GJA8 FMO5 LOC728989 NBPF13P GPR89B GJA5 RNU1-13P PRKAB2 LOC100505824 LINC01138 CH17-408M7.1 RNVU1-1 NUDT4P2 BCL9 CHD1L MIR6077 RNVU1-6 NUDT4P1 NBPF10
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion RNVU1-3 LOC100996763 PPIAL4G NBPF11 LOC101927468 NBPF14 LOC101928979 LOC100996517 RNVU1-7 LOC105371242 NBPF12 RNVU1-8 PDZK1P1 PDIA3P1 ACP6 NOTCH2NL LOC284561 PDE4DIP LOC105371226 LINC00624 MIR5087 HYDIN2 LOC100132057 GJA8 FMO5 LOC728989 NBPF13P GPR89B GJA5 RNU1-13P PRKAB2 LOC100505824 LINC01138 CH17-408M7.1 RNVU1-1 NUDT4P2 BCL9 CHD1L MIR6077 NUDT4P1 NBPF9 NBPF10
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss PDIA3P1 FMO5 PRKAB2 CHD1L

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