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Gene Symbol
SDF4
Assay Reference Genome
Location

Chr.1:1217047 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03033781_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51150

Gene Name:

 stromal cell derived factor 4

Gene Aliases:

 Cab45, SDF-4

Location:

 Chr.1:1216908-1232067 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SDF4 NM_016176.3 7 1883 NP_057260.2
NM_016547.2 7 1999 NP_057631.1
AF153686.1 7 1979 AAD51612.1
AF178986.1 7 1963 AAF44350.1
AK000717.1 5 2746
AK027277.1 BAB55012.1
AK055331.1 2 2478
AK075352.1 7 1817 BAC11563.1
AK126927.1 3 3401
AK222521.1 7 1801 BAD96241.1
BC006211.2 7 1764 AAH06211.1
BC007625.1 6 1632 AAH07625.1
BC008917.2 7 1783 AAH08917.1
BC011244.1 7 1737 AAH11244.1
BC022375.1 7 1817 AAH22375.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication MIR200B TTLL10-AS1 ACAP3 SDF4 UBE2J2 PUSL1 C1orf159 MIR200A CPTP RNF223 TNFRSF18 TAS1R3 MIR6726 AGRN LOC100288175 MIR429 CPSF3L MIR6727 TNFRSF4 TTLL10 B3GALT6 LINC01342 LOC105378948 SCNN1D FAM132A
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain MIR200B LOC107985728 TTLL10-AS1 SDF4 C1orf159 MIR200A HES4 SAMD11 RNF223 KLHL17 TNFRSF18 NOC2L AGRN ISG15 LOC100288175 MIR429 PLEKHN1 TNFRSF4 TTLL10 LOC100130417 FAM41C LINC01342 LOC105378948 PERM1 LOC284600
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC107985728 TTLL10-AS1 LOC107985729 MIB2 VWA1 FAM87B UBE2J2 C1orf159 LINC01128 HES4 CPTP SAMD11 CDK11A LOC148413 RNF223 TNFRSF18 TAS1R3 LINC00115 AURKAIP1 MMP23B LOC100288069 MIR6726 SLC35E2 LOC102724312 MIR429 ANKRD65 MIR6808 TTLL10 B3GALT6 FAM41C LINC01342 LOC105378948 NADK PERM1 SCNN1D CDK11B CCNL2 LOC284600 FAM132A MIR200B LOC100287934 MRPL20 ACAP3 SDF4 PUSL1 SSU72 MIR200A TMEM240 ATAD3A KLHL17 NOC2L SLC35E2B TMEM88B ATAD3B FNDC10 DVL1 AGRN MXRA8 ATAD3C ISG15 LOC100288175 PLEKHN1 CPSF3L MIR6727 TNFRSF4 LOC100130417 MMP23A
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC107985728 MORN1 LOC105378949 TTLL10-AS1 WASH7P LOC107985729 MIB2 OR4F16 UBE2J2 SKI OR4F29 HES4 LOC105378592 CPTP LOC148413 RNF223 TAS1R3 LINC00115 AURKAIP1 MMP23B LOC100288069 MTND2P28 DDX11L1 FAAP20 ANKRD65 TMEM52 LOC105378591 MIR6808 B3GALT6 MTND1P23 MIR1302-2 FAM41C LOC105378948 NADK PERM1 CDK11B LOC105378589 MIR6859-2 MIR200B MRPL20 ACAP3 SSU72 TMEM240 CFAP74 ATAD3A GABRD KLHL17 NOC2L TMEM88B ATAD3B GNB1 DVL1 LOC729737 MXRA8 ISG15 LOC100288175 CPSF3L PRKCZ LOC100129534 LOC100130417 LOC105378947 VWA1 FAM87B C1orf159 LINC01128 CALML6 SAMD11 CDK11A TNFRSF18 LOC101928626 MIR6726 SLC35E2 MIR6859-1 LOC102724312 MIR429 OR4F5 TTLL10 LINC01342 MIR6723 SCNN1D CCNL2 LOC100134822 LOC284600 FAM132A LOC100287934 SDF4 LOC100506504 PUSL1 MIR200A LOC102725121 SLC35E2B FNDC10 AGRN ATAD3C PLEKHN1 LOC100132287 LOC107984841 MIR6727 TNFRSF4 FAM138A LOC100133331 MMP23A
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion MIR200B MRPL20 TTLL10-AS1 ACAP3 SDF4 LOC107985729 MIB2 VWA1 UBE2J2 PUSL1 C1orf159 SSU72 MIR200A TMEM240 ATAD3A CPTP LOC148413 TNFRSF18 TAS1R3 AURKAIP1 MMP23B TMEM88B ATAD3B MIR6726 FNDC10 DVL1 MXRA8 ATAD3C LOC102724312 MIR429 ANKRD65 MIR6808 CPSF3L MIR6727 TNFRSF4 TTLL10 B3GALT6 LINC01342 SCNN1D CDK11B CCNL2 FAM132A
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss MIR200B LOC107985728 TTLL10-AS1 SDF4 FAM87B UBE2J2 C1orf159 MIR200A LINC01128 HES4 SAMD11 RNF223 KLHL17 TNFRSF18 LINC00115 NOC2L AGRN ISG15 LOC100288175 MIR429 PLEKHN1 TNFRSF4 TTLL10 B3GALT6 LOC100130417 FAM41C LINC01342 LOC105378948 PERM1 LOC284600 FAM132A
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion MIR200B TTLL10-AS1 AGRN SDF4 ISG15 LOC100288175 MIR429 PLEKHN1 C1orf159 MIR200A HES4 TNFRSF4 TTLL10 SAMD11 RNF223 KLHL17 TNFRSF18 NOC2L LINC01342 LOC105378948 PERM1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MIR200B LOC107985728 MRPL20 TTLL10-AS1 ACAP3 SDF4 UBE2J2 PUSL1 C1orf159 MIR200A HES4 CPTP SAMD11 LOC148413 RNF223 KLHL17 TNFRSF18 TAS1R3 NOC2L AURKAIP1 TMEM88B MIR6726 DVL1 AGRN MXRA8 ISG15 LOC100288175 MIR429 ANKRD65 PLEKHN1 MIR6808 CPSF3L MIR6727 TNFRSF4 TTLL10 B3GALT6 LOC100130417 LINC01342 LOC105378948 PERM1 SCNN1D CCNL2 LOC284600 FAM132A
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain MIR200B TTLL10-AS1 SDF4 MIR429 UBE2J2 C1orf159 MIR200A TNFRSF4 TTLL10 B3GALT6 RNF223 TNFRSF18 LINC01342 LOC105378948 SCNN1D FAM132A
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss MIR200B TTLL10-AS1 ACAP3 SDF4 UBE2J2 PUSL1 C1orf159 MIR200A CPTP RNF223 TNFRSF18 TAS1R3 AURKAIP1 MIR6726 DVL1 MXRA8 MIR429 MIR6808 CPSF3L MIR6727 TNFRSF4 TTLL10 B3GALT6 LINC01342 SCNN1D FAM132A
nsv544956 Chr.1:1171093 - 1241217 on Build GRCh38 Loss TNFRSF4 TTLL10-AS1 TTLL10 B3GALT6 SDF4 TNFRSF18
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain MIR200B TTLL10-AS1 ACAP3 SDF4 MIR429 UBE2J2 PUSL1 MIR200A CPSF3L MIR6727 TNFRSF4 TTLL10 B3GALT6 TNFRSF18 SCNN1D MIR6726 FAM132A

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