Hs03039219_cn

• Gene Symbol: RPF1
• Assay Reference Genome Location: Chr.1:84480963 on build GRCh38
• Cytoband: 1p22.3

Target Gene Details

• Entrez Gene ID: 80135
• Gene Name: ribosome production factor 1 homolog
• Gene Aliases: BXDC5
• Location: Chr.1:84479237-84498350 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RPF1	NM_025065.6			NP_079341.2
	AF322053.1			AAL37236.1
	AK022537.1			BAB14086.1
	BC016051.1			AAH16051.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv830437	Chr.1:84371841 - 84535586 on Build GRCh38	Gain+Loss	UOX RPF1 SPATA1 DNASE2B GNG5

More Information

Additional Information:

For this assay, SNP(s) [rs151098045] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA splicing factor

Gene Ontology Categories:

Process(es)

ribosomal large subunit assembly
maturation of 5.8S rRNA
maturation of LSU-rRNA

Function(s)

RNA binding
protein binding
rRNA primary transcript binding
poly(A) RNA binding