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Gene Symbol
SAMD11
Assay Reference Genome
Location

Chr.1:944045 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03041554_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
Your Price
Online offer:
4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 148398

Gene Name:

 sterile alpha motif domain containing 11

Gene Aliases:

 MRS

Location:

 Chr.1:925741-944581 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAMD11 NM_152486.2 14 2018 NP_689699.2
AK054643.1 7 1519 BAB70781.1
BC024295.2 10 1593 AAH24295.1
BC033213.1 8 1383 AAH33213.1
BM055062.1
JX093066.1 12 1992
JX093067.1 13 1956
JX093068.1 13 1941
JX093069.1 12 1765
JX093070.1 13 1893
JX093071.1 13 1890
JX093072.1 10 1563
JX093073.1 13 1878
JX093074.1 13 1860
JX093075.1 12 1752
JX093076.1 12 1752
JX093077.1 12 1698
JX093078.1 12 2132
JX093079.1 11 1614
JX093080.1 11 2186
JX093081.1 11 1611
JX093082.1 12 2084
JX093083.1 11 2183
JX093084.1 10 1808
JX093085.1 8 910
JX093086.1 13 1867
JX093087.1 13 1807
JX093088.1 8 907
JX093089.1 13 1862
JX093090.1 13 1856
JX093091.1 5 833
JX093092.1
JX093093.1 12 1775
JX093094.1 12 1730
JX093095.1 12 1727
JX093096.1 11 1543
JX093097.1 10 1427
JX093098.1 7 1452
JX093099.1 13 2220
JX093100.1 14 2023
JX093101.1 13 1815
JX093102.1 7 1328
JX093103.1 13 1927
JX093104.1 10 2029
JX093105.1 12 1816
JX093106.1 11 1602
JX093107.1 10 1486
JX093108.1 12 1765
JX093109.1 9 1378
JX093110.1 10 1545

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain SAMD11 LOC100130417 LOC284600 PERM1 RNF223 PLEKHN1 HES4 AGRN NOC2L LOC100288175 KLHL17 ISG15 LOC107985728 LOC105378948 C1orf159
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss TMEM88B TAS1R3 RNF223 HES4 MMP23B MTND2P28 LOC101928626 FNDC10 MIR200B LOC105378947 LOC105378949 MRPL20 LINC01128 MIR200A LOC107984841 OR4F5 UBE2J2 LOC102724312 LOC100288069 NADK CPSF3L LOC100129534 PRKCZ MIR1302-2 MIB2 PERM1 LOC100133331 ANKRD65 TNFRSF4 LOC100287934 FAM87B AURKAIP1 DDX11L1 FAM138A TTLL10 MTND1P23 CFAP74 OR4F16 SCNN1D SKI MIR6723 LOC100132287 FAAP20 ACAP3 WASH7P NOC2L MIR6859-1 MIR6859-2 ATAD3C ATAD3A CALML6 LOC105378948 LOC105378592 GABRD SAMD11 LOC100134822 TNFRSF18 VWA1 PLEKHN1 MMP23A AGRN DVL1 LOC105378591 MIR6727 ATAD3B LOC100288175 SLC35E2 LOC148413 MXRA8 CPTP MIR6808 LOC100130417 TMEM52 GNB1 ISG15 SDF4 B3GALT6 MIR6726 MORN1 CDK11A CCNL2 FAM41C LOC107985729 LINC00115 TMEM240 CDK11B LOC105378589 OR4F29 LOC100506504 LINC01342 PUSL1 TTLL10-AS1 FAM132A LOC102725121 LOC284600 SLC35E2B SSU72 LOC729737 MIR429 KLHL17 LOC107985728 C1orf159
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion SAMD11 LOC100130417 LOC284600 PERM1 RNF223 PLEKHN1 HES4 AGRN NOC2L LOC100288175 KLHL17 ISG15 LOC107985728 LOC105378948 C1orf159
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion NOC2L SAMD11 KLHL17 LOC100130417 LOC284600 PERM1 PLEKHN1 LOC107985728
dgv9n54 Chr.1:925754 - 952840 on Build GRCh38 Loss NOC2L SAMD11
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain SAMD11 TNFRSF18 PERM1 RNF223 FAM41C PLEKHN1 TNFRSF4 HES4 AGRN LOC100288175 TTLL10 MIR200B MIR200A LINC01342 TTLL10-AS1 LOC100130417 LOC284600 NOC2L MIR429 KLHL17 ISG15 SDF4 LOC107985728 LOC105378948 C1orf159
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss SAMD11 TMEM88B TAS1R3 TNFRSF18 VWA1 RNF223 PLEKHN1 HES4 MMP23A AGRN MMP23B DVL1 MIR6727 ATAD3B LOC100288175 SLC35E2 LOC148413 MXRA8 FNDC10 CPTP MIR200B MIR6808 MRPL20 LINC01128 MIR200A LOC100130417 UBE2J2 LOC102724312 LOC100288069 NADK ISG15 SDF4 CPSF3L B3GALT6 MIR6726 MIB2 CDK11A PERM1 CCNL2 FAM41C LOC107985729 ANKRD65 LINC00115 TNFRSF4 LOC100287934 TMEM240 FAM87B AURKAIP1 TTLL10 CDK11B SCNN1D LINC01342 PUSL1 TTLL10-AS1 FAM132A LOC284600 ACAP3 SLC35E2B SSU72 NOC2L MIR429 KLHL17 ATAD3C ATAD3A LOC107985728 LOC105378948 C1orf159
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain SAMD11 PERM1 RNF223 FAM41C PLEKHN1 LOC100133331 LINC00115 HES4 AGRN LOC100287934 FAM87B LOC100288175 MTND2P28 LOC101928626 MTND1P23 LOC105378947 OR4F16 LINC01128 MIR6723 LOC107984841 LOC100130417 LOC284600 NOC2L LOC100288069 KLHL17 ISG15 LOC107985728 LOC105378948 C1orf159
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss B3GALT6 SAMD11 TNFRSF18 PERM1 RNF223 FAM41C PLEKHN1 LINC00115 TNFRSF4 HES4 AGRN FAM87B LOC100288175 TTLL10 MIR200B LINC01128 MIR200A LINC01342 TTLL10-AS1 LOC100130417 FAM132A LOC284600 UBE2J2 NOC2L MIR429 KLHL17 ISG15 SDF4 LOC107985728 LOC105378948 C1orf159
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain SAMD11 LINC01342 PERM1 RNF223 PLEKHN1 HES4 AGRN NOC2L LOC100288175 KLHL17 ISG15 LOC105378948 C1orf159
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion MIR200A SAMD11 LINC01342 TNFRSF18 TTLL10-AS1 PERM1 RNF223 PLEKHN1 TNFRSF4 HES4 AGRN NOC2L LOC100288175 MIR429 KLHL17 TTLL10 ISG15 MIR200B SDF4 LOC105378948 C1orf159
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss AGRN NOC2L SAMD11 KLHL17 ISG15 LOC100130417 LOC284600 PERM1 PLEKHN1 LOC107985728 HES4
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain B3GALT6 MIR6726 SAMD11 TMEM88B TAS1R3 TNFRSF18 PERM1 CCNL2 RNF223 PLEKHN1 ANKRD65 TNFRSF4 HES4 AGRN DVL1 MIR6727 LOC100288175 AURKAIP1 LOC148413 TTLL10 MXRA8 CPTP MIR200B MIR6808 MRPL20 MIR200A SCNN1D LINC01342 PUSL1 TTLL10-AS1 LOC100130417 FAM132A LOC284600 ACAP3 UBE2J2 NOC2L MIR429 KLHL17 ISG15 SDF4 LOC107985728 LOC105378948 C1orf159 CPSF3L
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain LINC01128 NOC2L SAMD11 KLHL17 LOC100130417 LOC284600 PERM1 FAM41C PLEKHN1 LOC107985728 HES4

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:


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