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Gene Symbol
TNFRSF18
Assay Reference Genome
Location

Chr.1:1207452 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03337721_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8784

Gene Name:

 TNF receptor superfamily member 18

Gene Aliases:

 AITR, CD357, GITR, GITR-D

Location:

 Chr.1:1203508-1207900 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TNFRSF18 XM_017002722.1 1 449 XP_016858211.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MIR6723 MIR429 CCNL2 LOC100287934 LOC105378948 FAM132A SAMD11 PRKCZ MMP23A PLEKHN1 MMP23B ISG15 SCNN1D ATAD3C ATAD3A OR4F5 LOC729737 AGRN B3GALT6 MRPL20 MORN1 ACAP3 RNF223 TTLL10 MIB2 DVL1 DDX11L1 AURKAIP1 LOC101928626 LOC105378947 OR4F29 NADK KLHL17 ANKRD65 LOC102725121 FAM87B LOC100129534 LOC100132287 NOC2L LOC148413 TNFRSF18 TNFRSF4 FNDC10 LOC100130417 LOC107984841 LOC105378591 MIR6808 LINC00115 MIR6727 TMEM240 SDF4 TTLL10-AS1 MIR200B CALML6 FAAP20 TAS1R3 OR4F16 MIR200A WASH7P LOC105378949 MXRA8 LOC105378592 CDK11A FAM138A LOC100506504 LOC100134822 LOC105378589 C1orf159 LOC107985728 CPSF3L HES4 LINC01342 SLC35E2 TMEM52 UBE2J2 CPTP PERM1 LOC100288069 LOC284600 MIR6859-2 VWA1 MTND2P28 LOC100288175 LOC107985729 CDK11B FAM41C SSU72 MIR6859-1 PUSL1 ATAD3B MIR6726 MTND1P23 LOC100133331 SKI MIR1302-2 TMEM88B SLC35E2B GNB1 LOC102724312 CFAP74 GABRD LINC01128
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain SCNN1D MIR429 C1orf159 SDF4 LOC105378948 TTLL10-AS1 MIR200B B3GALT6 FAM132A TNFRSF18 MIR200A RNF223 TNFRSF4 LINC01342 UBE2J2 TTLL10
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss MIR6727 MIR429 AURKAIP1 SDF4 TTLL10-AS1 MIR200B TAS1R3 FAM132A MIR200A MXRA8 SCNN1D PUSL1 C1orf159 MIR6726 CPSF3L B3GALT6 TNFRSF18 ACAP3 RNF223 TNFRSF4 LINC01342 UBE2J2 TTLL10 CPTP DVL1 MIR6808
nsv544960 Chr.1:1204036 - 1207482 on Build GRCh38 Loss TNFRSF18
nsv544956 Chr.1:1171093 - 1241217 on Build GRCh38 Loss SDF4 TTLL10-AS1 TTLL10 B3GALT6 TNFRSF18 TNFRSF4
esv3566647 Chr.1:1207320 - 1207781 on Build GRCh38 Deletion TNFRSF18
esv9332 Chr.1:1207123 - 1207887 on Build GRCh38 Loss TNFRSF18
nsv544963 Chr.1:1206945 - 1214281 on Build GRCh38 Loss TNFRSF18 TNFRSF4
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication MIR6727 MIR429 SDF4 LOC105378948 TTLL10-AS1 MIR200B TAS1R3 FAM132A MIR200A LOC100288175 SCNN1D PUSL1 C1orf159 MIR6726 CPSF3L AGRN B3GALT6 TNFRSF18 ACAP3 RNF223 TNFRSF4 LINC01342 UBE2J2 TTLL10 CPTP
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain MIR429 SDF4 LOC105378948 TTLL10-AS1 MIR200B LOC284600 MIR200A SAMD11 LOC100288175 KLHL17 PLEKHN1 FAM41C ISG15 NOC2L C1orf159 LOC107985728 AGRN HES4 TNFRSF18 RNF223 TNFRSF4 LINC01342 LOC100130417 TTLL10 PERM1
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss MIR6727 MIR429 CCNL2 LOC100287934 TMEM240 SDF4 LOC105378948 TTLL10-AS1 MIR200B TAS1R3 FAM132A MIR200A SAMD11 MXRA8 CDK11A MMP23A PLEKHN1 MMP23B ISG15 SCNN1D ATAD3C ATAD3A C1orf159 LOC107985728 CPSF3L AGRN B3GALT6 HES4 MRPL20 ACAP3 RNF223 LINC01342 SLC35E2 UBE2J2 TTLL10 MIB2 CPTP DVL1 PERM1 AURKAIP1 LOC100288069 LOC284600 VWA1 NADK LOC100288175 KLHL17 LOC107985729 ANKRD65 CDK11B FAM41C SSU72 FAM87B PUSL1 NOC2L ATAD3B MIR6726 LOC148413 TNFRSF18 TNFRSF4 TMEM88B SLC35E2B FNDC10 LOC102724312 LOC100130417 LINC01128 MIR6808 LINC00115
esv2673981 Chr.1:1207339 - 1207760 on Build GRCh38 Deletion TNFRSF18
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion MIR6727 MIR429 AURKAIP1 CCNL2 TMEM240 SDF4 TTLL10-AS1 MIR200B VWA1 TAS1R3 FAM132A MIR200A MXRA8 LOC107985729 ANKRD65 CDK11B SSU72 MMP23B SCNN1D PUSL1 ATAD3C ATAD3B ATAD3A C1orf159 MIR6726 CPSF3L B3GALT6 MRPL20 LOC148413 TNFRSF18 ACAP3 TNFRSF4 TMEM88B LINC01342 FNDC10 LOC102724312 UBE2J2 TTLL10 MIB2 CPTP DVL1 MIR6808
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss MIR429 SDF4 LOC105378948 TTLL10-AS1 MIR200B LOC284600 FAM132A MIR200A SAMD11 LOC100288175 KLHL17 PLEKHN1 FAM41C FAM87B ISG15 NOC2L C1orf159 LOC107985728 AGRN B3GALT6 HES4 TNFRSF18 RNF223 TNFRSF4 LINC01342 LOC100130417 UBE2J2 TTLL10 LINC01128 LINC00115 PERM1
nsv1069687 Chr.1:1207338 - 1207760 on Build GRCh38 Deletion TNFRSF18
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion ISG15 MIR429 NOC2L C1orf159 SDF4 LOC105378948 TTLL10-AS1 MIR200B AGRN HES4 TNFRSF18 MIR200A RNF223 TNFRSF4 SAMD11 LINC01342 LOC100288175 KLHL17 PLEKHN1 TTLL10 PERM1
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MIR6727 MIR429 AURKAIP1 CCNL2 SDF4 LOC105378948 TTLL10-AS1 MIR200B LOC284600 TAS1R3 FAM132A MIR200A SAMD11 LOC100288175 MXRA8 KLHL17 ANKRD65 PLEKHN1 ISG15 SCNN1D PUSL1 NOC2L C1orf159 LOC107985728 MIR6726 CPSF3L AGRN B3GALT6 HES4 MRPL20 LOC148413 TNFRSF18 ACAP3 RNF223 TNFRSF4 TMEM88B LINC01342 LOC100130417 UBE2J2 TTLL10 CPTP DVL1 MIR6808 PERM1
dgv24n54 Chr.1:1205055 - 1213515 on Build GRCh38 Loss TNFRSF18 TNFRSF4
esv3584990 Chr.1:1207334 - 1207760 on Build GRCh38 Loss TNFRSF18
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain MIR6727 SCNN1D MIR429 PUSL1 MIR6726 CPSF3L SDF4 TTLL10-AS1 MIR200B B3GALT6 FAM132A TNFRSF18 MIR200A ACAP3 TNFRSF4 UBE2J2 TTLL10

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