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Gene Symbol
CDK11B
Assay Reference Genome
Location

Chr.1:1654235 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03343862_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 984

Gene Name:

 cyclin dependent kinase 11B

Gene Aliases:

 CDC2L1, CDK11, CDK11-p110, CDK11-p46, CDK11-p58, CLK-1, PITSLREA, PK58, p58, p58CDC2L1, p58CLK-1

Location:

 Chr.1:1635226-1659839 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDK11B NM_001291345.1 NP_001278274.1
NM_001787.2 NP_001778.2
NM_033486.2 NP_277021.2
NM_033487.2 NP_277022.1
NM_033489.2 NP_277024.2
NM_033490.2 NP_277025.1
XM_006711065.3 XP_006711128.1
XM_011542490.2 XP_011540792.1
XM_011542491.2 XP_011540793.1
XM_011542492.2 XP_011540794.1
XM_011542493.2 XP_011540795.1
XM_011542494.2 XP_011540796.1
XM_011542495.2 XP_011540797.1
XM_017002925.1 XP_016858414.1
XM_017002926.1 XP_016858415.1
XM_017002927.1 XP_016858416.1
XM_017002928.1 XP_016858417.1
AF067512.1 AAC72077.1
AF067513.1 AAC72078.1
AF067514.1 AAC72079.1
AF067515.1 AAC72080.1
AF067516.1 AAC72081.1
AF067517.1 AAC72082.1
AF174497.1 AAF36538.1
AK000081.1
AK295607.1
AK304679.1
BC009375.2 AAH09375.1
BC104661.1 AAI04662.1
BC139777.1
BC140714.1
BC171773.1
DC295949.1
DC362247.1
DC393302.1
U04816.1 AAA19582.1
U04817.1 AAA19583.1
U04818.1 AAA19584.1
U04824.1 AAA19586.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv5n111 Chr.1:1575421 - 1823403 on Build GRCh38 Deletion SLC35E2B MMP23A FNDC10 CDK11A MIB2 CDK11B MMP23B SLC35E2 NADK GNB1
dgv8n100 Chr.1:1569349 - 1741152 on Build GRCh38 Loss SLC35E2B MMP23A FNDC10 CDK11A MIB2 CDK11B MMP23B SLC35E2 SSU72
esv3575582 Chr.1:1624086 - 1721336 on Build GRCh38 Gain SLC35E2B MMP23A CDK11A MIB2 CDK11B MMP23B
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC100287934 LOC107984841 PRKCZ SSU72 MIR200A TTLL10-AS1 LOC105378948 ATAD3C VWA1 ATAD3B MIR6808 TTLL10 UBE2J2 LOC105378589 ACAP3 FAAP20 ATAD3A OR4F16 MTND2P28 CALML6 MIR1302-2 WASH7P FAM41C MIR6726 NOC2L LOC107985728 MIR6859-1 LOC102725121 CPTP AURKAIP1 LOC101928626 MTND1P23 LOC100133331 LOC729737 MRPL20 SLC35E2 KLHL17 MORN1 DDX11L1 MIB2 MMP23B LOC100288069 CCNL2 CPSF3L SDF4 LOC284600 LOC100134822 TMEM240 SAMD11 FAM132A FAM87B FNDC10 RNF223 PUSL1 ANKRD65 TNFRSF4 CDK11A OR4F29 NADK MIR200B C1orf159 AGRN LINC00115 ISG15 MXRA8 TAS1R3 LOC107985729 SLC35E2B PERM1 LOC100130417 TNFRSF18 SCNN1D LINC01342 MIR6859-2 GNB1 LOC100129534 MMP23A FAM138A LOC100132287 CDK11B LOC148413 MIR429 LOC102724312 DVL1 SKI LOC105378949 HES4 LOC100506504 PLEKHN1 LOC105378591 B3GALT6 LINC01128 LOC105378592 LOC105378947 CFAP74 MIR6723 TMEM52 OR4F5 LOC100288175 MIR6727 GABRD TMEM88B
nsv1160797 Chr.1:1566216 - 1805918 on Build GRCh38 Duplication SLC35E2B MMP23A FNDC10 CDK11A MIB2 CDK11B MMP23B SLC35E2 SSU72 NADK GNB1
dgv2e199 Chr.1:1653096 - 1721890 on Build GRCh38 Deletion SLC35E2B MMP23A CDK11A CDK11B
esv2760410 Chr.1:1565561 - 1756248 on Build GRCh38 Gain+Loss SLC35E2B MMP23A FNDC10 CDK11A MIB2 CDK11B MMP23B SLC35E2 SSU72 NADK
nsv545017 Chr.1:1615322 - 1663759 on Build GRCh38 Loss SLC35E2B MIB2 CDK11B MMP23B
esv3585007 Chr.1:1647187 - 1714507 on Build GRCh38 Loss SLC35E2B MMP23A CDK11A CDK11B
esv27786 Chr.1:1632502 - 1752267 on Build GRCh38 Gain SLC35E2B MMP23A CDK11A CDK11B MMP23B SLC35E2 NADK
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss FAM87B FNDC10 LOC100287934 RNF223 PUSL1 SSU72 MIR200A ANKRD65 TNFRSF4 TTLL10-AS1 CDK11A LOC105378948 ATAD3C NADK VWA1 MIR200B ATAD3B MIR6808 C1orf159 TTLL10 AGRN UBE2J2 ACAP3 LINC00115 ATAD3A ISG15 MXRA8 TAS1R3 LOC107985729 SLC35E2B PERM1 FAM41C MIR6726 NOC2L LOC100130417 TNFRSF18 LOC107985728 SCNN1D LINC01342 CPTP AURKAIP1 MMP23A CDK11B MRPL20 LOC148413 MIR429 LOC102724312 SLC35E2 KLHL17 DVL1 HES4 MIB2 PLEKHN1 MMP23B B3GALT6 LINC01128 LOC100288069 CCNL2 CPSF3L SDF4 LOC284600 TMEM240 SAMD11 LOC100288175 MIR6727 FAM132A TMEM88B
nsv545018 Chr.1:1638499 - 1688102 on Build GRCh38 Loss SLC35E2B CDK11B
dgv3n67 Chr.1:1653920 - 1735718 on Build GRCh38 Gain SLC35E2B MMP23A CDK11A CDK11B SLC35E2
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss MMP23A FNDC10 CDK11B MRPL20 LOC148413 LOC102724312 SLC35E2 PRKCZ SSU72 ANKRD65 CDK11A LOC105378949 MIB2 LOC105378591 ATAD3C MMP23B NADK VWA1 ATAD3B LOC105378589 CCNL2 ATAD3A CFAP74 LOC107985729 TMEM240 TMEM52 CALML6 SLC35E2B GABRD TMEM88B GNB1

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