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Gene Symbol
CDK11B
Assay Reference Genome
Location

Chr.1:1654235 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03343862_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 984

Gene Name:

 cyclin dependent kinase 11B

Gene Aliases:

 CDC2L1, CDK11, CDK11-p110, CDK11-p46, CDK11-p58, CLK-1, PITSLREA, PK58, p58, p58CDC2L1, p58CLK-1

Location:

 Chr.1:1635226-1659839 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CDK11B NM_001291345.1 NP_001278274.1
NM_001787.2 NP_001778.2
NM_033486.2 NP_277021.2
NM_033487.2 NP_277022.1
NM_033489.2 NP_277024.2
NM_033490.2 NP_277025.1
XM_006711065.3 XP_006711128.1
XM_011542490.2 XP_011540792.1
XM_011542491.2 XP_011540793.1
XM_011542492.2 XP_011540794.1
XM_011542493.2 XP_011540795.1
XM_011542494.2 XP_011540796.1
XM_011542495.2 XP_011540797.1
XM_017002925.1 XP_016858414.1
XM_017002926.1 XP_016858415.1
XM_017002927.1 XP_016858416.1
XM_017002928.1 XP_016858417.1
AF067512.1 AAC72077.1
AF067513.1 AAC72078.1
AF067514.1 AAC72079.1
AF067515.1 AAC72080.1
AF067516.1 AAC72081.1
AF067517.1 AAC72082.1
AF174497.1 AAF36538.1
AK000081.1
AK295607.1
AK304679.1
BC009375.2 AAH09375.1
BC104661.1 AAI04662.1
BC139777.1
BC140714.1
BC171773.1
DC295949.1
DC362247.1
DC393302.1
U04816.1 AAA19582.1
U04817.1 AAA19583.1
U04818.1 AAA19584.1
U04824.1 AAA19586.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv5n111 Chr.1:1575421 - 1823403 on Build GRCh38 Deletion SLC35E2 CDK11A FNDC10 MIB2 MMP23A NADK CDK11B GNB1 SLC35E2B MMP23B
dgv8n100 Chr.1:1569349 - 1741152 on Build GRCh38 Loss SLC35E2 CDK11A FNDC10 MIB2 MMP23A CDK11B SLC35E2B SSU72 MMP23B
esv3575582 Chr.1:1624086 - 1721336 on Build GRCh38 Gain CDK11A MIB2 MMP23A CDK11B SLC35E2B MMP23B
esv3550788 Chr.1:1653096 - 1726348 on Build GRCh38 Deletion SLC35E2 CDK11A MMP23A CDK11B SLC35E2B
nsv1160797 Chr.1:1566216 - 1805918 on Build GRCh38 Duplication SLC35E2 CDK11A FNDC10 MIB2 MMP23A NADK CDK11B GNB1 SLC35E2B SSU72 MMP23B
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MIR200B LOC100132287 AURKAIP1 MIR6723 TAS1R3 C1orf159 MIB2 TTLL10-AS1 MIR6808 ACAP3 PLEKHN1 MIR6859-2 LOC102724312 LOC100287934 LOC100129534 LOC107984841 LOC102725121 LOC105378948 ATAD3C LOC105378592 LOC105378591 TTLL10 SDF4 LOC100288175 NADK MIR6859-1 SLC35E2B LOC107985728 FAM87B MORN1 ATAD3B MTND2P28 RNF223 LOC100506504 ISG15 FAM41C KLHL17 GABRD LOC729737 TNFRSF18 VWA1 MIR6727 TMEM52 FAM132A AGRN LOC100134822 MIR200A ATAD3A SSU72 OR4F5 LOC100288069 CDK11B MIR1302-2 WASH7P LOC101928626 MXRA8 DVL1 LOC148413 MIR429 SKI MRPL20 LOC100130417 SAMD11 TNFRSF4 FNDC10 LOC105378589 PUSL1 GNB1 MMP23B CFAP74 PERM1 LINC00115 TMEM88B LOC107985729 CCNL2 LOC105378949 SLC35E2 FAM138A CDK11A MMP23A MIR6726 HES4 DDX11L1 CPSF3L TMEM240 PRKCZ CPTP OR4F16 ANKRD65 LOC105378947 UBE2J2 LOC284600 B3GALT6 FAAP20 LINC01342 LOC100133331 OR4F29 SCNN1D MTND1P23 NOC2L CALML6 LINC01128
esv2760410 Chr.1:1565561 - 1756248 on Build GRCh38 Gain+Loss SLC35E2 CDK11A FNDC10 MIB2 MMP23A NADK CDK11B SLC35E2B SSU72 MMP23B
esv3585007 Chr.1:1647187 - 1714507 on Build GRCh38 Loss CDK11A MMP23A CDK11B SLC35E2B
nsv545017 Chr.1:1615322 - 1663759 on Build GRCh38 Loss MIB2 CDK11B SLC35E2B MMP23B
esv27786 Chr.1:1632502 - 1752267 on Build GRCh38 Gain SLC35E2 CDK11A MMP23A NADK CDK11B SLC35E2B MMP23B
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss MIR200B FAM132A AURKAIP1 AGRN TAS1R3 MIR200A ATAD3A C1orf159 SSU72 LOC100288069 MIB2 CDK11B TTLL10-AS1 MIR6808 ACAP3 MXRA8 DVL1 LOC148413 MIR429 MRPL20 LOC100130417 PLEKHN1 SAMD11 LOC102724312 LOC100287934 TNFRSF4 FNDC10 PUSL1 LOC105378948 MMP23B ATAD3C PERM1 LINC00115 TMEM88B LOC107985729 CCNL2 TTLL10 SDF4 SLC35E2 CDK11A LOC100288175 MMP23A NADK MIR6726 SLC35E2B HES4 LOC107985728 CPSF3L FAM87B TMEM240 ATAD3B RNF223 CPTP ANKRD65 UBE2J2 ISG15 LOC284600 B3GALT6 LINC01342 FAM41C SCNN1D KLHL17 NOC2L TNFRSF18 VWA1 MIR6727 LINC01128
dgv3n67 Chr.1:1653920 - 1735718 on Build GRCh38 Gain SLC35E2 CDK11A MMP23A CDK11B SLC35E2B
nsv545018 Chr.1:1638499 - 1688102 on Build GRCh38 Loss CDK11B SLC35E2B
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss LOC105378591 TMEM52 TMEM88B LOC107985729 CCNL2 ATAD3A SSU72 LOC105378949 SLC35E2 CDK11A MIB2 MMP23A NADK CDK11B SLC35E2B LOC148413 TMEM240 PRKCZ MRPL20 ATAD3B ANKRD65 LOC102724312 FNDC10 LOC105378589 GABRD GNB1 CALML6 VWA1 MMP23B ATAD3C CFAP74

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