Genomic Map
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Target Gene Details
Entrez Gene ID: | 148398 |
Gene Name: | sterile alpha motif domain containing 11 |
Gene Aliases: |
MRS |
Location: |
Chr.1:925741-944581 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SAMD11 | NM_152486.2 | NP_689699.2 | ||
| CN342795.1 | ||||
| JX093066.1 | ||||
| JX093067.1 | ||||
| JX093068.1 | ||||
| JX093069.1 | ||||
| JX093070.1 | ||||
| JX093071.1 | ||||
| JX093072.1 | ||||
| JX093073.1 | ||||
| JX093074.1 | ||||
| JX093075.1 | ||||
| JX093076.1 | ||||
| JX093077.1 | ||||
| JX093078.1 | ||||
| JX093079.1 | ||||
| JX093080.1 | ||||
| JX093081.1 | ||||
| JX093082.1 | ||||
| JX093083.1 | ||||
| JX093084.1 | ||||
| JX093085.1 | ||||
| JX093086.1 | ||||
| JX093087.1 | ||||
| JX093088.1 | ||||
| JX093089.1 | ||||
| JX093090.1 | ||||
| JX093091.1 | ||||
| JX093092.1 | ||||
| JX093093.1 | ||||
| JX093094.1 | ||||
| JX093095.1 | ||||
| JX093096.1 | ||||
| JX093097.1 | ||||
| JX093098.1 | ||||
| JX093099.1 | ||||
| JX093100.1 | ||||
| JX093101.1 | ||||
| JX093102.1 | ||||
| JX093103.1 | ||||
| JX093104.1 | ||||
| JX093105.1 | ||||
| JX093106.1 | ||||
| JX093107.1 | ||||
| JX093108.1 | ||||
| JX093109.1 | ||||
| JX093110.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv2762302 | Chr.1:914637 - 1106320 on Build GRCh38 | Gain |
 LOC105378948
PLEKHN1
LOC107985728
LOC100288175
PERM1
LOC284600
NOC2L
ISG15
AGRN
LOC100130417
HES4
C1orf159
SAMD11
RNF223
KLHL17
|
| nsv482937 | Chr.1:10001 - 2368561 on Build GRCh38 | Loss |
LOC148413
LOC105378589
LOC284600
MIR429
MIR6808
LOC729737
LINC00115
LOC100134822
MIR200B
TNFRSF18
SSU72
C1orf159
PUSL1
SAMD11
MIR6859-2
LOC107985728
MMP23B
CALML6
MMP23A
AGRN
LOC105378592
FAM87B
LOC105378591
SLC35E2B
PRKCZ
DVL1
CPSF3L
FNDC10
ATAD3C
CDK11A
SDF4
FAAP20
ISG15
SKI
HES4
ATAD3B
TTLL10-AS1
RNF223
MRPL20
SLC35E2
TTLL10
LOC101928626
ACAP3
MTND2P28
MIR6723
LOC107984841
LOC102724312
LOC100133331
LOC100287934
MIR200A
NADK
MIB2
KLHL17
OR4F5
LOC100288175
LOC100132287
MXRA8
NOC2L
GABRD
LOC107985729
OR4F16
ANKRD65
TNFRSF4
TMEM240
CPTP
CCNL2
LOC100506504
MIR6726
FAM41C
PLEKHN1
FAM138A
TAS1R3
AURKAIP1
MIR1302-2
DDX11L1
MTND1P23
ATAD3A
LINC01128
LINC01342
SCNN1D
TMEM52
OR4F29
PERM1
FAM132A
LOC105378949
LOC100129534
B3GALT6
CFAP74
UBE2J2
LOC105378948
LOC105378947
WASH7P
MIR6859-1
MIR6727
MORN1
GNB1
CDK11B
LOC100130417
VWA1
LOC102725121
LOC100288069
TMEM88B
|
| nsv950451 | Chr.1:899421 - 1094520 on Build GRCh38 | Deletion |
LOC105378948
PLEKHN1
LOC107985728
LOC100288175
PERM1
LOC284600
NOC2L
ISG15
AGRN
LOC100130417
HES4
C1orf159
SAMD11
RNF223
KLHL17
|
| nsv509035 | Chr.1:891406 - 985724 on Build GRCh38 | Insertion |
PLEKHN1
LOC107985728
LOC100130417
PERM1
LOC284600
SAMD11
NOC2L
KLHL17
|
| dgv9n54 | Chr.1:925754 - 952840 on Build GRCh38 | Loss |
SAMD11
NOC2L
|
| nsv428334 | Chr.1:874371 - 1220569 on Build GRCh38 | Gain |
LINC01342
LOC100288175
PERM1
LOC284600
MIR429
SDF4
NOC2L
ISG15
TNFRSF4
MIR200B
TNFRSF18
HES4
C1orf159
TTLL10-AS1
SAMD11
FAM41C
RNF223
LOC105378948
PLEKHN1
LOC107985728
TTLL10
AGRN
LOC100130417
MIR200A
KLHL17
|
| nsv10161 | Chr.1:776731 - 1777210 on Build GRCh38 | Gain+Loss |
LOC148413
LOC100288175
LOC284600
MXRA8
MIR429
NOC2L
LOC107985729
MIR6808
ANKRD65
LINC00115
TNFRSF4
MIR200B
TMEM240
TNFRSF18
CPTP
CCNL2
SSU72
MIR6726
C1orf159
PUSL1
SAMD11
FAM41C
PLEKHN1
LOC107985728
MMP23B
TAS1R3
MMP23A
AGRN
AURKAIP1
FAM87B
SLC35E2B
DVL1
ATAD3A
CPSF3L
LINC01128
LINC01342
SCNN1D
FNDC10
ATAD3C
PERM1
CDK11A
SDF4
ISG15
FAM132A
B3GALT6
HES4
ATAD3B
TTLL10-AS1
UBE2J2
RNF223
LOC105378948
MRPL20
SLC35E2
TTLL10
MIR6727
ACAP3
LOC102724312
CDK11B
LOC100130417
VWA1
LOC100287934
MIR200A
LOC100288069
TMEM88B
NADK
MIB2
KLHL17
|
| dgv5n100 | Chr.1:585989 - 1114424 on Build GRCh38 | Gain |
LINC01128
LOC100288175
PERM1
LOC284600
NOC2L
OR4F16
ISG15
LINC00115
HES4
C1orf159
SAMD11
FAM41C
RNF223
LOC105378948
PLEKHN1
LOC105378947
LOC107985728
LOC101928626
MTND2P28
AGRN
MIR6723
LOC107984841
FAM87B
LOC100130417
LOC100133331
LOC100287934
LOC100288069
MTND1P23
KLHL17
|
| nsv517709 | Chr.1:817186 - 1275912 on Build GRCh38 | Gain+Loss |
LINC01128
LINC01342
LOC100288175
PERM1
LOC284600
MIR429
SDF4
NOC2L
ISG15
LINC00115
TNFRSF4
MIR200B
TNFRSF18
FAM132A
B3GALT6
HES4
C1orf159
TTLL10-AS1
SAMD11
FAM41C
UBE2J2
RNF223
LOC105378948
PLEKHN1
LOC107985728
TTLL10
AGRN
FAM87B
LOC100130417
MIR200A
KLHL17
|
| dgv1n111 | Chr.1:690090 - 939522 on Build GRCh38 | Duplication |
LINC01128
LOC107985728
LOC284600
OR4F16
LINC00115
LOC107984841
FAM87B
LOC100130417
LOC100133331
LOC100287934
LOC100288069
SAMD11
FAM41C
|
| dgv3n111 | Chr.1:783283 - 939522 on Build GRCh38 | Duplication |
LINC01128
LINC00115
FAM87B
LOC107985728
LOC100130417
LOC100287934
LOC284600
SAMD11
FAM41C
|
| dgv6n54 | Chr.1:917392 - 934930 on Build GRCh38 | Loss |
LOC107985728
LOC100130417
LOC284600
SAMD11
|
| dgv2n67 | Chr.1:877618 - 1426500 on Build GRCh38 | Gain |
LINC01342
SCNN1D
LOC148413
LOC100288175
PERM1
LOC284600
MXRA8
MIR429
SDF4
NOC2L
MIR6808
ISG15
ANKRD65
TNFRSF4
MIR200B
TNFRSF18
FAM132A
CPTP
CCNL2
B3GALT6
MIR6726
HES4
C1orf159
PUSL1
TTLL10-AS1
SAMD11
UBE2J2
RNF223
LOC105378948
PLEKHN1
MRPL20
LOC107985728
TTLL10
MIR6727
ACAP3
TAS1R3
AGRN
AURKAIP1
LOC100130417
MIR200A
DVL1
TMEM88B
KLHL17
CPSF3L
|
| nsv544898 | Chr.1:924665 - 943937 on Build GRCh38 | Gain |
LOC107985728
SAMD11
|
| nsv832980 | Chr.1:848279 - 1007037 on Build GRCh38 | Gain |
LINC01128
PLEKHN1
LOC107985728
LOC100130417
HES4
PERM1
LOC284600
SAMD11
FAM41C
NOC2L
KLHL17
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
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