Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 148398 |
Gene Name: | sterile alpha motif domain containing 11 |
Gene Aliases: |
MRS |
Location: |
Chr.1:925741-944581 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SAMD11 | NM_152486.2 | NP_689699.2 | ||
| CN342795.1 | ||||
| JX093066.1 | ||||
| JX093067.1 | ||||
| JX093068.1 | ||||
| JX093069.1 | ||||
| JX093070.1 | ||||
| JX093071.1 | ||||
| JX093072.1 | ||||
| JX093073.1 | ||||
| JX093074.1 | ||||
| JX093075.1 | ||||
| JX093076.1 | ||||
| JX093077.1 | ||||
| JX093078.1 | ||||
| JX093079.1 | ||||
| JX093080.1 | ||||
| JX093081.1 | ||||
| JX093082.1 | ||||
| JX093083.1 | ||||
| JX093084.1 | ||||
| JX093085.1 | ||||
| JX093086.1 | ||||
| JX093087.1 | ||||
| JX093088.1 | ||||
| JX093089.1 | ||||
| JX093090.1 | ||||
| JX093091.1 | ||||
| JX093092.1 | ||||
| JX093093.1 | ||||
| JX093094.1 | ||||
| JX093095.1 | ||||
| JX093096.1 | ||||
| JX093097.1 | ||||
| JX093098.1 | ||||
| JX093099.1 | ||||
| JX093100.1 | ||||
| JX093101.1 | ||||
| JX093102.1 | ||||
| JX093103.1 | ||||
| JX093104.1 | ||||
| JX093105.1 | ||||
| JX093106.1 | ||||
| JX093107.1 | ||||
| JX093108.1 | ||||
| JX093109.1 | ||||
| JX093110.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv2762302 | Chr.1:914637 - 1106320 on Build GRCh38 | Gain |
 AGRN
PLEKHN1
LOC105378948
NOC2L
KLHL17
LOC284600
LOC107985728
SAMD11
ISG15
C1orf159
HES4
LOC100130417
LOC100288175
RNF223
PERM1
|
| nsv482937 | Chr.1:10001 - 2368561 on Build GRCh38 | Loss |
WASH7P
AGRN
ATAD3C
DDX11L1
FAM41C
FAM138A
LOC105378591
GNB1
TMEM88B
LOC102725121
LOC148413
SSU72
TTLL10-AS1
TNFRSF18
FNDC10
NOC2L
MIR6726
MIR6723
LOC107985728
LOC101928626
LINC01128
CDK11A
LINC00115
MIB2
LOC100288175
LOC107984841
FAAP20
LOC107985729
MIR200A
UBE2J2
PLEKHN1
SLC35E2B
LOC100287934
CFAP74
NADK
ACAP3
LOC100132287
LINC01342
ISG15
TTLL10
LOC100134822
CALML6
GABRD
SLC35E2
LOC284600
TNFRSF4
VWA1
PRKCZ
MXRA8
MTND1P23
RNF223
OR4F16
PERM1
MIR6727
TMEM240
MIR6859-1
SKI
AURKAIP1
CPTP
TAS1R3
OR4F5
LOC100133331
PUSL1
ATAD3A
DVL1
ANKRD65
LOC105378949
LOC729737
MTND2P28
SAMD11
LOC100129534
HES4
LOC100130417
LOC100506504
TMEM52
B3GALT6
MIR6808
LOC105378948
LOC105378947
ATAD3B
FAM132A
LOC105378592
OR4F29
MIR6859-2
CCNL2
MMP23A
CDK11B
LOC100288069
LOC102724312
CPSF3L
MIR1302-2
MORN1
FAM87B
LOC105378589
SCNN1D
MMP23B
SDF4
KLHL17
MIR429
MRPL20
C1orf159
MIR200B
|
| nsv950451 | Chr.1:899421 - 1094520 on Build GRCh38 | Deletion |
AGRN
PLEKHN1
LOC105378948
NOC2L
KLHL17
LOC284600
LOC107985728
SAMD11
ISG15
C1orf159
HES4
LOC100130417
LOC100288175
RNF223
PERM1
|
| nsv509035 | Chr.1:891406 - 985724 on Build GRCh38 | Insertion |
SAMD11
PLEKHN1
NOC2L
KLHL17
LOC284600
LOC100130417
PERM1
LOC107985728
|
| dgv8n54 | Chr.1:925754 - 943937 on Build GRCh38 | Loss |
SAMD11
|
| nsv428334 | Chr.1:874371 - 1220569 on Build GRCh38 | Gain |
MIR200A
AGRN
PLEKHN1
LOC105378948
FAM41C
LINC01342
ISG15
TTLL10
TTLL10-AS1
TNFRSF18
SDF4
NOC2L
KLHL17
MIR429
LOC284600
TNFRSF4
LOC107985728
SAMD11
C1orf159
HES4
LOC100130417
LOC100288175
RNF223
MIR200B
PERM1
|
| dgv5n100 | Chr.1:585989 - 1114424 on Build GRCh38 | Gain |
AGRN
PLEKHN1
LOC105378948
LOC100287934
LOC105378947
FAM41C
ISG15
LOC100133331
LOC100288069
FAM87B
NOC2L
KLHL17
LOC284600
MIR6723
LOC107985728
MTND2P28
SAMD11
LOC101928626
LINC01128
C1orf159
HES4
LINC00115
LOC100130417
MTND1P23
LOC100288175
LOC107984841
RNF223
OR4F16
PERM1
|
| nsv10161 | Chr.1:776731 - 1777210 on Build GRCh38 | Gain+Loss |
TMEM240
AGRN
ATAD3C
AURKAIP1
CPTP
FAM41C
TAS1R3
PUSL1
TMEM88B
LOC148413
SSU72
ATAD3A
TTLL10-AS1
DVL1
TNFRSF18
ANKRD65
FNDC10
NOC2L
MIR6726
LOC107985728
SAMD11
LINC01128
CDK11A
HES4
LINC00115
MIB2
LOC100130417
LOC100288175
LOC107985729
MIR200A
UBE2J2
B3GALT6
MIR6808
PLEKHN1
SLC35E2B
LOC105378948
LOC100287934
NADK
ATAD3B
FAM132A
ACAP3
LINC01342
CCNL2
ISG15
MMP23A
TTLL10
CDK11B
LOC100288069
LOC102724312
CPSF3L
FAM87B
SCNN1D
MMP23B
SDF4
KLHL17
MIR429
SLC35E2
MRPL20
LOC284600
TNFRSF4
VWA1
MXRA8
C1orf159
RNF223
MIR200B
PERM1
MIR6727
|
| dgv1n111 | Chr.1:690090 - 939522 on Build GRCh38 | Duplication |
FAM87B
LOC100287934
LOC284600
LOC107985728
FAM41C
SAMD11
LINC01128
LINC00115
LOC100130417
LOC100133331
LOC100288069
LOC107984841
OR4F16
|
| nsv517709 | Chr.1:817186 - 1275912 on Build GRCh38 | Gain+Loss |
MIR200A
UBE2J2
AGRN
B3GALT6
PLEKHN1
LOC105378948
FAM132A
FAM41C
LINC01342
ISG15
TTLL10
TTLL10-AS1
FAM87B
TNFRSF18
SDF4
NOC2L
KLHL17
MIR429
LOC284600
TNFRSF4
LOC107985728
SAMD11
LINC01128
C1orf159
HES4
LINC00115
LOC100130417
LOC100288175
RNF223
MIR200B
PERM1
|
| dgv3n111 | Chr.1:783283 - 939522 on Build GRCh38 | Duplication |
FAM41C
FAM87B
SAMD11
LOC100287934
LINC01128
LOC284600
LINC00115
LOC100130417
LOC107985728
|
| dgv2n67 | Chr.1:877618 - 1426500 on Build GRCh38 | Gain |
MIR200A
UBE2J2
AGRN
B3GALT6
MIR6808
PLEKHN1
LOC105378948
FAM132A
ACAP3
AURKAIP1
CPTP
TAS1R3
LINC01342
CCNL2
ISG15
TTLL10
PUSL1
TMEM88B
CPSF3L
LOC148413
TTLL10-AS1
SCNN1D
DVL1
TNFRSF18
ANKRD65
SDF4
NOC2L
KLHL17
MIR429
MRPL20
LOC284600
MIR6726
TNFRSF4
LOC107985728
SAMD11
MXRA8
C1orf159
HES4
LOC100130417
LOC100288175
RNF223
MIR200B
PERM1
MIR6727
|
| nsv544895 | Chr.1:917392 - 1054900 on Build GRCh38 | Loss |
AGRN
SAMD11
PLEKHN1
ISG15
NOC2L
KLHL17
LOC284600
HES4
LOC100130417
PERM1
LOC107985728
|
| nsv832980 | Chr.1:848279 - 1007037 on Build GRCh38 | Gain |
FAM41C
SAMD11
PLEKHN1
NOC2L
KLHL17
LINC01128
LOC284600
HES4
LOC100130417
PERM1
LOC107985728
|
| nsv544897 | Chr.1:924665 - 934930 on Build GRCh38 | Gain+Loss |
SAMD11
LOC107985728
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Back To Top