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Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147197189 on build GRCh38
Cytoband
1q21.1
Assay ID Hs03349098_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 NP_001138302.1
NM_001461.3 NP_001452.2
XM_005272946.4 XP_005273003.1
XM_005272947.4 XP_005273004.1
XM_005272948.4 XP_005273005.1
XM_006711245.3 XP_006711308.1
XM_011509350.2 XP_011507652.1
XM_011509351.2 XP_011507653.1
XM_017000801.1 XP_016856290.1
XM_017000802.1 XP_016856291.1
AK222728.1 BAD96448.1
AK225739.1
AK314647.1
BC035687.1 AAH35687.1
L37080.1 AAA67849.1
Z47553.1 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain CH17-408M7.1 NOTCH2NL NBPF12 GJA5 GJA8 RNVU1-8 NUDT4P2 NUDT4P1 LOC105371242 MIR6077 CHD1L PPIAL4G PRKAB2 GPR89B RNVU1-3 PDE4DIP RNVU1-1 LOC105371226 FMO5 NBPF13P LINC01138 RNVU1-7 HYDIN2 RNVU1-6 LOC101928979 PDZK1P1 ACP6 RNU1-13P LOC100505824 LOC100996517 PDIA3P1 LINC00624 NBPF14 LOC100132057 NBPF11 NBPF10 LOC100996763 BCL9 LOC101927468 LOC728989 LOC284561 MIR5087
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss NBPF12 RNVU1-8 NUDT4P2 NUDT4P1 CHD1L RNVU1-3 PDE4DIP NBPF13P RBM8A LINC01138 CD160 RNVU1-6 HFE2 PDZK1P1 ACP6 NUDT17 PDZK1 ANKRD34A LOC100132057 NBPF11 PIAS3 LOC100996763 BCL9 LOC101927468 LOC284561 MIR5087 CH17-408M7.1 NOTCH2NL GJA5 GJA8 LOC105371242 MIR6077 PPIAL4G PRKAB2 GPR89B RNF115 RNVU1-1 ITGA10 LOC105371226 FMO5 POLR3GL RNVU1-7 HYDIN2 GNRHR2 LOC101928979 GPR89A PEX11B POLR3C RNU1-13P LOC100505824 MIR6736 LOC100996517 PDIA3P1 LINC00624 NBPF14 TXNIP NBPF10 LIX1L LOC728989 ANKRD35
dgv67e199 Chr.1:147188956 - 147198583 on Build GRCh38 Deletion FMO5 CHD1L
nsv1121713 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion PDIA3P1 FMO5 NBPF13P RNVU1-8 LOC728989 CHD1L PRKAB2
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss CH17-408M7.1 NOTCH2NL NBPF12 GJA5 GJA8 RNVU1-8 NUDT4P2 NUDT4P1 LOC105371242 MIR6077 CHD1L PPIAL4G PRKAB2 GPR89B RNVU1-3 PDE4DIP RNVU1-1 LOC105371226 FMO5 NBPF13P LINC01138 RNVU1-7 HYDIN2 PDZK1P1 ACP6 RNU1-13P LOC100505824 LOC100996517 PDIA3P1 LINC00624 NBPF14 LOC100132057 NBPF11 NBPF10 LOC100996763 BCL9 LOC101927468 LOC728989 LOC284561 MIR5087
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion CH17-408M7.1 NOTCH2NL NBPF12 GJA5 GJA8 RNVU1-8 NUDT4P2 NUDT4P1 LOC105371242 MIR6077 CHD1L PPIAL4G PRKAB2 GPR89B RNVU1-3 PDE4DIP RNVU1-1 LOC105371226 FMO5 NBPF13P POLR3GL LINC01138 RNVU1-7 HYDIN2 RNVU1-6 HFE2 LOC101928979 PDZK1P1 ACP6 RNU1-13P LOC100505824 LOC100996517 PDIA3P1 LINC00624 NBPF14 ANKRD34A LOC100132057 NBPF11 TXNIP NBPF10 LIX1L LOC100996763 BCL9 LOC101927468 LOC728989 LOC284561 MIR5087
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication CH17-408M7.1 NOTCH2NL NBPF12 GJA5 GJA8 RNVU1-8 NUDT4P2 NUDT4P1 LOC105371242 MIR6077 CHD1L PPIAL4G PRKAB2 GPR89B RNVU1-3 PDE4DIP RNVU1-1 LOC105371226 FMO5 NBPF13P LINC01138 RNVU1-7 HYDIN2 PDZK1P1 ACP6 RNU1-13P LOC100505824 LOC100996517 PDIA3P1 LINC00624 NBPF14 LOC100132057 NBPF11 LOC100996763 BCL9 LOC101927468 LOC728989 LOC284561 MIR5087
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain CH17-408M7.1 NOTCH2NL NBPF12 GJA5 GJA8 RNVU1-8 NUDT4P2 NUDT4P1 LOC105371242 MIR6077 CHD1L PPIAL4G PRKAB2 GPR89B RNVU1-3 PDE4DIP RNVU1-1 LOC105371226 FMO5 NBPF13P LINC01138 RNVU1-7 HYDIN2 RNVU1-6 LOC101928979 PDZK1P1 ACP6 RNU1-13P LOC100505824 LOC100996517 PDIA3P1 LINC00624 NBPF14 LOC100132057 NBPF11 NBPF10 LOC100996763 BCL9 LOC101927468 LOC728989 LOC284561 MIR5087
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion CH17-408M7.1 NOTCH2NL NBPF12 GJA5 GJA8 RNVU1-8 NUDT4P2 NUDT4P1 LOC105371242 MIR6077 CHD1L PPIAL4G PRKAB2 GPR89B RNVU1-3 PDE4DIP RNVU1-1 LOC105371226 FMO5 NBPF13P LINC01138 RNVU1-7 HYDIN2 NBPF9 LOC101928979 PDZK1P1 ACP6 RNU1-13P LOC100505824 LOC100996517 PDIA3P1 LINC00624 NBPF14 LOC100132057 NBPF11 NBPF10 LOC100996763 BCL9 LOC101927468 LOC728989 LOC284561 MIR5087
esv3587435 Chr.1:147189056 - 147198713 on Build GRCh38 Loss FMO5 CHD1L
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss PDIA3P1 FMO5 CHD1L PRKAB2

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