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Gene Symbol
SAMD11
Assay Reference Genome
Location

Chr.1:941408 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03351489_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 148398

Gene Name:

 sterile alpha motif domain containing 11

Gene Aliases:

 MRS

Location:

 Chr.1:925741-944581 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAMD11 NM_152486.2 NP_689699.2
AK054643.1 BAB70781.1
BC024295.2 AAH24295.1
BC033213.1 AAH33213.1
JX093066.1
JX093067.1
JX093068.1
JX093069.1
JX093070.1
JX093071.1
JX093072.1
JX093073.1
JX093074.1
JX093075.1
JX093076.1
JX093077.1
JX093078.1
JX093079.1
JX093080.1
JX093081.1
JX093082.1
JX093083.1
JX093084.1
JX093085.1
JX093086.1
JX093087.1
JX093088.1
JX093089.1
JX093090.1
JX093091.1
JX093092.1
JX093093.1
JX093094.1
JX093095.1
JX093096.1
JX093097.1
JX093098.1
JX093099.1
JX093100.1
JX093101.1
JX093102.1
JX093103.1
JX093104.1
JX093105.1
JX093106.1
JX093107.1
JX093108.1
JX093109.1
JX093110.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv15n54 Chr.1:934063 - 943937 on Build GRCh38 Loss SAMD11
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain KLHL17 LOC107985728 AGRN ISG15 LOC100288175 SAMD11 LOC284600 PERM1 NOC2L C1orf159 LOC105378948 PLEKHN1 RNF223 HES4 LOC100130417
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MIR6859-1 DVL1 LOC100287934 TMEM240 MTND1P23 LOC107985729 NOC2L UBE2J2 TNFRSF4 MMP23A FAM41C LOC105378947 LOC100506504 MIR200A CPSF3L CDK11A LOC100288069 FAM87B RNF223 MIR6808 LOC100130417 LOC101928626 LOC105378949 MXRA8 CPTP MIR6727 ANKRD65 C1orf159 KLHL17 LOC105378592 FAAP20 LOC148413 MIR200B ATAD3C AGRN ATAD3B ATAD3A VWA1 MIR429 LOC100134822 LOC729737 MORN1 MIR6859-2 LOC100129534 SLC35E2 DDX11L1 LOC100288175 FAM132A LOC284600 CFAP74 MIR6723 PUSL1 SDF4 LOC105378948 AURKAIP1 ACAP3 LOC102724312 LINC01128 TAS1R3 TMEM88B ISG15 GNB1 PERM1 LOC100133331 OR4F16 NADK OR4F29 MMP23B CDK11B HES4 MTND2P28 LOC105378589 TMEM52 B3GALT6 LOC107985728 LOC105378591 TTLL10 MIR1302-2 SAMD11 LOC102725121 OR4F5 TNFRSF18 MIR6726 CALML6 SSU72 GABRD LOC100132287 TTLL10-AS1 LOC107984841 PRKCZ FAM138A MIB2 SCNN1D SLC35E2B WASH7P FNDC10 CCNL2 LINC01342 MRPL20 LINC00115 PLEKHN1 SKI
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion KLHL17 LOC107985728 AGRN ISG15 LOC100288175 SAMD11 LOC284600 PERM1 NOC2L C1orf159 LOC105378948 PLEKHN1 RNF223 HES4 LOC100130417
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion KLHL17 NOC2L LOC107985728 SAMD11 LOC284600 PLEKHN1 PERM1 LOC100130417
dgv9n54 Chr.1:925754 - 952840 on Build GRCh38 Loss NOC2L SAMD11
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain LOC107985728 TTLL10 LOC100288175 SAMD11 LOC284600 TNFRSF18 NOC2L C1orf159 TTLL10-AS1 SDF4 LOC105378948 TNFRSF4 KLHL17 MIR200B FAM41C AGRN ISG15 MIR200A PERM1 LINC01342 MIR429 PLEKHN1 RNF223 HES4 LOC100130417
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss SLC35E2 LOC100288175 DVL1 LOC100287934 FAM132A LOC284600 TMEM240 PUSL1 LOC107985729 NOC2L UBE2J2 SDF4 LOC105378948 AURKAIP1 ACAP3 TNFRSF4 LOC102724312 MMP23A LINC01128 TAS1R3 FAM41C TMEM88B ISG15 MIR200A PERM1 NADK CPSF3L CDK11A LOC100288069 FAM87B MMP23B CDK11B RNF223 MIR6808 HES4 LOC100130417 B3GALT6 LOC107985728 TTLL10 MXRA8 CPTP SAMD11 MIR6727 TNFRSF18 ANKRD65 MIR6726 SSU72 C1orf159 TTLL10-AS1 MIB2 SCNN1D KLHL17 SLC35E2B LOC148413 MIR200B FNDC10 ATAD3C AGRN ATAD3B ATAD3A CCNL2 LINC01342 VWA1 MRPL20 MIR429 LINC00115 PLEKHN1
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain MTND2P28 LOC101928626 LOC107985728 LOC100288175 LOC100287934 SAMD11 LOC284600 MIR6723 MTND1P23 NOC2L C1orf159 LOC107984841 LOC105378948 KLHL17 LINC01128 FAM41C AGRN ISG15 LOC105378947 PERM1 LOC100133331 OR4F16 LOC100288069 FAM87B LINC00115 PLEKHN1 RNF223 HES4 LOC100130417
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss B3GALT6 LOC107985728 TTLL10 LOC100288175 SAMD11 FAM132A LOC284600 TNFRSF18 NOC2L UBE2J2 C1orf159 TTLL10-AS1 SDF4 LOC105378948 TNFRSF4 KLHL17 MIR200B LINC01128 FAM41C AGRN ISG15 MIR200A PERM1 LINC01342 MIR429 FAM87B LINC00115 PLEKHN1 RNF223 HES4 LOC100130417
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain KLHL17 AGRN ISG15 LOC100288175 SAMD11 PERM1 LINC01342 NOC2L C1orf159 LOC105378948 PLEKHN1 RNF223 HES4
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion KLHL17 MIR200B AGRN TTLL10 ISG15 LOC100288175 SAMD11 MIR200A PERM1 TNFRSF18 LINC01342 MIR429 NOC2L C1orf159 TTLL10-AS1 SDF4 LOC105378948 PLEKHN1 RNF223 HES4 TNFRSF4
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss KLHL17 NOC2L LOC107985728 AGRN ISG15 SAMD11 LOC284600 PLEKHN1 PERM1 HES4 LOC100130417
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain B3GALT6 LOC107985728 TTLL10 MXRA8 LOC100288175 CPTP DVL1 SAMD11 FAM132A LOC284600 MIR6727 TNFRSF18 ANKRD65 MIR6726 PUSL1 NOC2L UBE2J2 C1orf159 TTLL10-AS1 SDF4 LOC105378948 AURKAIP1 SCNN1D ACAP3 TNFRSF4 KLHL17 LOC148413 MIR200B TAS1R3 TMEM88B AGRN ISG15 MIR200A PERM1 CCNL2 LINC01342 MRPL20 MIR429 CPSF3L PLEKHN1 RNF223 MIR6808 HES4 LOC100130417
nsv544898 Chr.1:924665 - 943937 on Build GRCh38 Gain LOC107985728 SAMD11
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain KLHL17 NOC2L LINC01128 FAM41C LOC107985728 SAMD11 LOC284600 PLEKHN1 PERM1 HES4 LOC100130417

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:


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