Genomic Map
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Target Gene Details
Entrez Gene ID: | 148398 |
Gene Name: | sterile alpha motif domain containing 11 |
Gene Aliases: |
MRS |
Location: |
Chr.1:925741-944581 on Build GRCh38 |
Assay Gene Location: | Within Intron 7 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SAMD11 | NM_152486.2 | NP_689699.2 | ||
| AK054643.1 | BAB70781.1 | |||
| BC024295.2 | AAH24295.1 | |||
| BC033213.1 | AAH33213.1 | |||
| CN293867.1 | ||||
| JX093066.1 | ||||
| JX093067.1 | ||||
| JX093068.1 | ||||
| JX093069.1 | ||||
| JX093070.1 | ||||
| JX093071.1 | ||||
| JX093072.1 | ||||
| JX093073.1 | ||||
| JX093074.1 | ||||
| JX093075.1 | ||||
| JX093076.1 | ||||
| JX093077.1 | ||||
| JX093078.1 | ||||
| JX093079.1 | ||||
| JX093080.1 | ||||
| JX093081.1 | ||||
| JX093082.1 | ||||
| JX093083.1 | ||||
| JX093084.1 | ||||
| JX093085.1 | ||||
| JX093086.1 | ||||
| JX093087.1 | ||||
| JX093088.1 | ||||
| JX093089.1 | ||||
| JX093090.1 | ||||
| JX093091.1 | ||||
| JX093092.1 | ||||
| JX093093.1 | ||||
| JX093094.1 | ||||
| JX093095.1 | ||||
| JX093096.1 | ||||
| JX093097.1 | ||||
| JX093098.1 | ||||
| JX093099.1 | ||||
| JX093100.1 | ||||
| JX093101.1 | ||||
| JX093102.1 | ||||
| JX093103.1 | ||||
| JX093104.1 | ||||
| JX093105.1 | ||||
| JX093106.1 | ||||
| JX093107.1 | ||||
| JX093108.1 | ||||
| JX093109.1 | ||||
| JX093110.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| dgv15n54 | Chr.1:934063 - 943937 on Build GRCh38 | Loss |
 SAMD11
|
| esv2762302 | Chr.1:914637 - 1106320 on Build GRCh38 | Gain |
LOC100288175
AGRN
SAMD11
LOC100130417
LOC105378948
KLHL17
RNF223
LOC107985728
ISG15
PERM1
LOC284600
PLEKHN1
HES4
NOC2L
C1orf159
|
| nsv482937 | Chr.1:10001 - 2368561 on Build GRCh38 | Loss |
LOC100288175
CALML6
UBE2J2
LOC105378947
ACAP3
LINC01128
PERM1
SLC35E2B
CFAP74
SLC35E2
MIR200B
B3GALT6
ATAD3C
TNFRSF18
TMEM52
TTLL10-AS1
CCNL2
MIB2
LOC284600
AURKAIP1
PLEKHN1
OR4F29
WASH7P
LOC105378949
TMEM240
MTND1P23
OR4F5
LOC100130417
TAS1R3
VWA1
SDF4
FAM138A
LOC729737
DVL1
TTLL10
MIR6727
C1orf159
AGRN
LOC100129534
DDX11L1
FAM132A
LOC100133331
LOC107985728
ISG15
MIR200A
GABRD
LOC102724312
LOC100288069
HES4
LINC00115
MIR6726
CPSF3L
LOC105378948
LOC105378592
LOC102725121
SKI
LINC01342
NADK
ATAD3A
MIR6723
LOC107984841
MIR6859-2
NOC2L
MMP23A
LOC101928626
TMEM88B
MXRA8
GNB1
PUSL1
KLHL17
MIR1302-2
MIR429
SCNN1D
LOC100132287
LOC107985729
MORN1
CDK11B
ATAD3B
MTND2P28
SAMD11
PRKCZ
LOC100134822
FAAP20
MIR6808
RNF223
LOC105378589
LOC100287934
CDK11A
MRPL20
LOC148413
FAM41C
LOC100506504
CPTP
MMP23B
MIR6859-1
FAM87B
SSU72
ANKRD65
OR4F16
LOC105378591
FNDC10
TNFRSF4
|
| nsv950451 | Chr.1:899421 - 1094520 on Build GRCh38 | Deletion |
LOC100288175
AGRN
SAMD11
LOC100130417
LOC105378948
KLHL17
RNF223
LOC107985728
ISG15
PERM1
LOC284600
PLEKHN1
HES4
NOC2L
C1orf159
|
| nsv509035 | Chr.1:891406 - 985724 on Build GRCh38 | Insertion |
PERM1
LOC284600
SAMD11
PLEKHN1
LOC100130417
NOC2L
KLHL17
LOC107985728
|
| dgv9n54 | Chr.1:925754 - 952840 on Build GRCh38 | Loss |
SAMD11
NOC2L
|
| nsv428334 | Chr.1:874371 - 1220569 on Build GRCh38 | Gain |
LOC100288175
SAMD11
LOC100130417
LOC105378948
SDF4
RNF223
LINC01342
PERM1
TTLL10
NOC2L
MIR200B
C1orf159
FAM41C
AGRN
TNFRSF18
KLHL17
TTLL10-AS1
LOC107985728
MIR429
ISG15
MIR200A
LOC284600
PLEKHN1
HES4
TNFRSF4
|
| nsv10161 | Chr.1:776731 - 1777210 on Build GRCh38 | Gain+Loss |
MIR6726
LOC100288175
UBE2J2
CPSF3L
ACAP3
LOC105378948
LINC01128
LINC01342
NADK
ATAD3A
PERM1
SLC35E2B
NOC2L
SLC35E2
MIR200B
B3GALT6
MMP23A
TMEM88B
MXRA8
ATAD3C
TNFRSF18
PUSL1
KLHL17
TTLL10-AS1
CCNL2
MIR429
MIB2
LOC284600
AURKAIP1
SCNN1D
PLEKHN1
LOC107985729
CDK11B
TMEM240
ATAD3B
SAMD11
LOC100130417
TAS1R3
VWA1
SDF4
MIR6808
RNF223
DVL1
TTLL10
LOC100287934
CDK11A
MIR6727
MRPL20
LOC148413
C1orf159
FAM41C
AGRN
CPTP
MMP23B
FAM132A
FAM87B
SSU72
LOC107985728
ISG15
MIR200A
ANKRD65
LOC102724312
LOC100288069
HES4
LINC00115
FNDC10
TNFRSF4
|
| dgv5n100 | Chr.1:585989 - 1114424 on Build GRCh38 | Gain |
MTND1P23
LOC100288175
MTND2P28
SAMD11
LOC105378947
LOC100130417
LOC105378948
LINC01128
RNF223
MIR6723
PERM1
LOC107984841
LOC100287934
NOC2L
C1orf159
FAM41C
AGRN
LOC101928626
FAM87B
KLHL17
LOC100133331
LOC107985728
ISG15
LOC284600
OR4F16
LOC100288069
PLEKHN1
HES4
LINC00115
|
| nsv517709 | Chr.1:817186 - 1275912 on Build GRCh38 | Gain+Loss |
LOC100288175
UBE2J2
SAMD11
LOC100130417
LOC105378948
LINC01128
SDF4
RNF223
LINC01342
PERM1
TTLL10
NOC2L
MIR200B
B3GALT6
C1orf159
FAM41C
AGRN
FAM132A
TNFRSF18
FAM87B
KLHL17
TTLL10-AS1
LOC107985728
MIR429
ISG15
MIR200A
LOC284600
PLEKHN1
HES4
LINC00115
TNFRSF4
|
| nsv1013524 | Chr.1:939510 - 1161955 on Build GRCh38 | Gain |
LOC100288175
AGRN
SAMD11
LOC105378948
KLHL17
RNF223
LINC01342
ISG15
PERM1
PLEKHN1
HES4
NOC2L
C1orf159
|
| nsv1160644 | Chr.1:939652 - 1220663 on Build GRCh38 | Deletion |
LOC100288175
AGRN
SAMD11
LOC105378948
TNFRSF18
KLHL17
SDF4
RNF223
LINC01342
TTLL10-AS1
MIR429
ISG15
PERM1
MIR200A
TTLL10
PLEKHN1
HES4
NOC2L
TNFRSF4
MIR200B
C1orf159
|
| nsv544895 | Chr.1:917392 - 1054900 on Build GRCh38 | Loss |
PERM1
LOC284600
AGRN
SAMD11
PLEKHN1
LOC100130417
HES4
NOC2L
KLHL17
LOC107985728
ISG15
|
| dgv2n67 | Chr.1:877618 - 1426500 on Build GRCh38 | Gain |
MIR6726
LOC100288175
UBE2J2
SAMD11
CPSF3L
LOC100130417
ACAP3
LOC105378948
TAS1R3
SDF4
MIR6808
RNF223
LINC01342
DVL1
PERM1
TTLL10
MIR6727
NOC2L
MIR200B
MRPL20
LOC148413
B3GALT6
C1orf159
AGRN
TMEM88B
MXRA8
CPTP
FAM132A
TNFRSF18
PUSL1
KLHL17
TTLL10-AS1
CCNL2
LOC107985728
MIR429
ISG15
MIR200A
LOC284600
AURKAIP1
SCNN1D
ANKRD65
PLEKHN1
HES4
TNFRSF4
|
| nsv544898 | Chr.1:924665 - 943937 on Build GRCh38 | Gain |
SAMD11
LOC107985728
|
| nsv832980 | Chr.1:848279 - 1007037 on Build GRCh38 | Gain |
FAM41C
PERM1
LOC284600
SAMD11
PLEKHN1
LOC100130417
HES4
NOC2L
LINC01128
KLHL17
LOC107985728
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
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