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Gene Symbol
SAMD11
Assay Reference Genome
Location

Chr.1:937852 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03363422_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
Your Price
Online offer:
4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 148398

Gene Name:

 sterile alpha motif domain containing 11

Gene Aliases:

 MRS

Location:

 Chr.1:925741-944581 on Build GRCh38

Assay Gene Location:

 Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAMD11 NM_152486.2 NP_689699.2
BC024295.2 AAH24295.1
CN293867.1
CN342795.1
JX093066.1
JX093067.1
JX093068.1
JX093069.1
JX093070.1
JX093071.1
JX093072.1
JX093073.1
JX093074.1
JX093075.1
JX093076.1
JX093077.1
JX093078.1
JX093079.1
JX093080.1
JX093081.1
JX093082.1
JX093083.1
JX093084.1
JX093085.1
JX093086.1
JX093087.1
JX093088.1
JX093089.1
JX093090.1
JX093091.1
JX093092.1
JX093093.1
JX093094.1
JX093095.1
JX093096.1
JX093097.1
JX093098.1
JX093099.1
JX093100.1
JX093101.1
JX093102.1
JX093103.1
JX093104.1
JX093105.1
JX093106.1
JX093107.1
JX093108.1
JX093109.1
JX093110.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv15n54 Chr.1:934063 - 943937 on Build GRCh38 Loss SAMD11
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain KLHL17 LOC100288175 LOC105378948 C1orf159 LOC107985728 PLEKHN1 SAMD11 HES4 RNF223 NOC2L PERM1 LOC284600 LOC100130417 AGRN ISG15
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss KLHL17 LOC107985728 AURKAIP1 VWA1 LOC101928626 CFAP74 RNF223 ATAD3B MIR6808 LOC100129534 MIR6727 FAAP20 DDX11L1 TMEM52 TMEM240 LINC01342 LOC729737 MIR429 PLEKHN1 ATAD3C SLC35E2B TNFRSF4 NOC2L LOC284600 SDF4 LINC00115 LOC107984841 SKI LOC100132287 MMP23B LOC148413 FAM41C TTLL10 MORN1 CCNL2 TTLL10-AS1 LOC100133331 TAS1R3 LOC102725121 OR4F29 LOC100288175 SSU72 MXRA8 NADK MIR6723 PERM1 UBE2J2 MTND1P23 PRKCZ OR4F5 MIR1302-2 MIR200B LOC100506504 LOC105378591 DVL1 GABRD LOC100134822 LOC100130417 TNFRSF18 FAM87B B3GALT6 LOC105378947 LINC01128 CPTP SAMD11 LOC105378592 FAM138A LOC100288069 ACAP3 MMP23A MIR6726 MTND2P28 CDK11A MIR6859-1 ANKRD65 MIR200A FNDC10 GNB1 PUSL1 C1orf159 MIB2 MRPL20 TMEM88B OR4F16 SLC35E2 AGRN WASH7P LOC100287934 CDK11B CALML6 LOC105378589 SCNN1D LOC105378948 MIR6859-2 LOC105378949 FAM132A HES4 CPSF3L ATAD3A LOC107985729 LOC102724312 ISG15
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion KLHL17 LOC100288175 LOC105378948 C1orf159 LOC107985728 PLEKHN1 SAMD11 HES4 RNF223 NOC2L PERM1 LOC284600 LOC100130417 AGRN ISG15
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion KLHL17 LOC107985728 LOC284600 LOC100130417 PLEKHN1 SAMD11 NOC2L PERM1
dgv9n54 Chr.1:925754 - 952840 on Build GRCh38 Loss SAMD11 NOC2L
nsv544932 Chr.1:934429 - 938178 on Build GRCh38 Loss SAMD11
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain KLHL17 C1orf159 LOC107985728 MIR200B RNF223 FAM41C TTLL10 LOC100130417 TNFRSF18 AGRN TTLL10-AS1 LINC01342 LOC100288175 LOC105378948 MIR429 PLEKHN1 SAMD11 HES4 TNFRSF4 NOC2L PERM1 LOC284600 SDF4 MIR200A ISG15
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss KLHL17 LOC107985728 AURKAIP1 MIR200B VWA1 DVL1 RNF223 ATAD3B MIR6808 MIR6727 LOC100130417 TNFRSF18 TMEM240 FAM87B B3GALT6 LINC01342 LINC01128 MIR429 PLEKHN1 CPTP SAMD11 ATAD3C SLC35E2B TNFRSF4 NOC2L LOC100288069 ACAP3 MMP23A LOC284600 MIR6726 SDF4 LINC00115 CDK11A ANKRD65 MIR200A FNDC10 PUSL1 C1orf159 MMP23B MIB2 MRPL20 TMEM88B LOC148413 FAM41C TTLL10 SLC35E2 CCNL2 AGRN TTLL10-AS1 LOC100287934 TAS1R3 CDK11B LOC100288175 SCNN1D LOC105378948 FAM132A SSU72 HES4 MXRA8 NADK PERM1 UBE2J2 CPSF3L ATAD3A LOC107985729 LOC102724312 ISG15
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain KLHL17 C1orf159 LOC107985728 LOC101928626 RNF223 FAM41C OR4F16 LOC100130417 AGRN LOC100287934 LOC100133331 FAM87B LOC105378947 LOC100288175 LOC105378948 LINC01128 PLEKHN1 SAMD11 HES4 NOC2L MIR6723 PERM1 LOC100288069 MTND1P23 LOC284600 MTND2P28 LINC00115 LOC107984841 ISG15
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss KLHL17 C1orf159 LOC107985728 MIR200B RNF223 FAM41C TTLL10 LOC100130417 TNFRSF18 AGRN TTLL10-AS1 FAM87B B3GALT6 LINC01342 LOC100288175 LOC105378948 LINC01128 MIR429 PLEKHN1 FAM132A SAMD11 HES4 TNFRSF4 NOC2L PERM1 UBE2J2 LOC284600 SDF4 LINC00115 MIR200A ISG15
dgv1n111 Chr.1:690090 - 939522 on Build GRCh38 Duplication LINC01128 LOC107985728 SAMD11 LOC100288069 FAM41C OR4F16 LOC284600 LOC100130417 LINC00115 LOC107984841 LOC100287934 LOC100133331 FAM87B
dgv3n111 Chr.1:783283 - 939522 on Build GRCh38 Duplication FAM41C LINC01128 LOC107985728 LOC284600 LOC100130417 LINC00115 SAMD11 LOC100287934 FAM87B
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss KLHL17 LOC107985728 LOC284600 LOC100130417 PLEKHN1 SAMD11 AGRN HES4 NOC2L PERM1 ISG15
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain KLHL17 PUSL1 C1orf159 LOC107985728 AURKAIP1 MIR200B MRPL20 DVL1 RNF223 TMEM88B LOC148413 TTLL10 MIR6808 MIR6727 LOC100130417 CCNL2 TNFRSF18 AGRN TTLL10-AS1 TAS1R3 B3GALT6 LINC01342 LOC100288175 SCNN1D LOC105378948 MIR429 PLEKHN1 FAM132A CPTP SAMD11 HES4 MXRA8 TNFRSF4 NOC2L PERM1 UBE2J2 ACAP3 CPSF3L LOC284600 MIR6726 SDF4 ANKRD65 MIR200A ISG15
nsv544898 Chr.1:924665 - 943937 on Build GRCh38 Gain LOC107985728 SAMD11
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain KLHL17 FAM41C LINC01128 LOC107985728 LOC284600 LOC100130417 PLEKHN1 SAMD11 HES4 NOC2L PERM1
nsv544924 Chr.1:934170 - 938178 on Build GRCh38 Gain+Loss SAMD11

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:


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