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Gene Symbol
MIB2
Assay Reference Genome
Location

Chr.1:1624372 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03370061_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 142678

Gene Name:

 mindbomb E3 ubiquitin protein ligase 2

Gene Aliases:

 ZZANK1, ZZZ5

Location:

 Chr.1:1615188-1630610 on Build GRCh38

Assay Gene Location:

 Within Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MIB2 NM_001170686.1 NP_001164157.1
NM_001170687.1 NP_001164158.1
NM_001170688.1 NP_001164159.1
NM_001170689.1 NP_001164160.1
NM_080875.2 NP_543151.2
NR_033183.1
XM_006710372.1 XP_006710435.1
XM_011540731.2 XP_011539033.1
XM_011540736.2 XP_011539038.1
XM_011540737.2 XP_011539039.1
XM_011540741.2 XP_011539043.1
XM_011540742.2 XP_011539044.1
XM_017000349.1 XP_016855838.1
XM_017000350.1 XP_016855839.1
XM_017000351.1 XP_016855840.1
XM_017000352.1 XP_016855841.1
XM_017000353.1 XP_016855842.1
XM_017000354.1 XP_016855843.1
XM_017000355.1 XP_016855844.1
XM_017000356.1 XP_016855845.1
XM_017000357.1 XP_016855846.1
XM_017000358.1 XP_016855847.1
XM_017000359.1 XP_016855848.1
XM_017000360.1 XP_016855849.1
XM_017000361.1 XP_016855850.1
XM_017000362.1 XP_016855851.1
XM_017000363.1 XP_016855852.1
XM_017000364.1 XP_016855853.1
XM_017000365.1 XP_016855854.1
XM_017000366.1 XP_016855855.1
AB064367.1 BAB82979.1
AB074480.1 BAB92950.1
AB076691.1 BAC00992.1
AB076692.1 BAC00993.1
AB076693.1 BAC00994.1
AB097000.1 BAC77353.1
AK097106.1 BAC04952.1
AK098785.1 BAC05413.1
AK122751.1
AK122863.1
AK128167.1
AK128553.1
AK293642.1
AK302757.1
AK309362.1
BC016490.1 AAH16490.1
BC037542.1 AAH37542.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv5n111 Chr.1:1575421 - 1823403 on Build GRCh38 Deletion MMP23A MIB2 SLC35E2 FNDC10 GNB1 SLC35E2B CDK11A CDK11B MMP23B NADK
dgv8n100 Chr.1:1569349 - 1741152 on Build GRCh38 Loss SSU72 MMP23A MIB2 SLC35E2 FNDC10 SLC35E2B CDK11A CDK11B MMP23B
esv3575582 Chr.1:1624086 - 1721336 on Build GRCh38 Gain MMP23A MIB2 SLC35E2B CDK11A CDK11B MMP23B
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss TMEM240 CDK11A HES4 LINC00115 RNF223 TTLL10-AS1 MIB2 FAM41C AGRN MIR6726 LINC01342 TNFRSF4 SCNN1D SAMD11 LINC01128 MMP23A DVL1 MIR6727 FAM87B TAS1R3 SLC35E2B MMP23B MIR200B AURKAIP1 LOC102724312 FNDC10 LOC107985729 LOC107985728 B3GALT6 LOC284600 SDF4 SLC35E2 VWA1 ATAD3C LOC100287934 CDK11B LOC100288175 CPSF3L CCNL2 PLEKHN1 ATAD3A CPTP PUSL1 LOC100130417 MIR6808 FAM132A LOC105378948 ISG15 PERM1 MIR429 NOC2L ANKRD65 MRPL20 TMEM88B MIR200A ATAD3B UBE2J2 KLHL17 LOC100288069 SSU72 C1orf159 TTLL10 MXRA8 TNFRSF18 ACAP3 LOC148413 NADK
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MTND2P28 CDK11A HES4 OR4F5 MORN1 LINC00115 GABRD TTLL10-AS1 MIB2 FAM41C MIR6726 LOC105378592 MIR6859-1 LOC101928626 TNFRSF4 SCNN1D DVL1 SKI MIR6727 FAM87B SLC35E2B LOC100132287 MMP23B PRKCZ AURKAIP1 LOC102724312 B3GALT6 LOC729737 LOC102725121 LOC284600 SLC35E2 ATAD3C LOC100288175 CPSF3L DDX11L1 CPTP MIR6808 NOC2L MIR6723 WASH7P MRPL20 ATAD3B UBE2J2 SSU72 MXRA8 TNFRSF18 TMEM52 GNB1 LOC105378589 LOC148413 NADK TMEM240 LOC105378947 MIR6859-2 RNF223 AGRN LINC01342 SAMD11 LINC01128 MMP23A FAM138A TAS1R3 MIR200B FNDC10 LOC107985729 LOC107985728 FAAP20 SDF4 VWA1 LOC100287934 CDK11B MIR1302-2 CCNL2 LOC105378591 PLEKHN1 ATAD3A PUSL1 LOC100130417 FAM132A LOC105378948 OR4F16 LOC100133331 ISG15 PERM1 LOC100506504 LOC100134822 MIR429 ANKRD65 LOC105378949 TMEM88B MIR200A MTND1P23 LOC107984841 KLHL17 CFAP74 LOC100288069 C1orf159 TTLL10 CALML6 LOC100129534 ACAP3 OR4F29
nsv1160797 Chr.1:1566216 - 1805918 on Build GRCh38 Duplication SSU72 MMP23A MIB2 SLC35E2 FNDC10 GNB1 SLC35E2B CDK11A CDK11B MMP23B NADK
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion TMEM240 B3GALT6 SDF4 VWA1 ATAD3C CDK11B CPSF3L CCNL2 ATAD3A CPTP PUSL1 MIR6808 TTLL10-AS1 MIB2 FAM132A MIR6726 LINC01342 TNFRSF4 SCNN1D MIR429 ANKRD65 DVL1 MRPL20 MIR6727 TAS1R3 TMEM88B MIR200A ATAD3B UBE2J2 MMP23B SSU72 C1orf159 TTLL10 MIR200B AURKAIP1 MXRA8 TNFRSF18 LOC102724312 ACAP3 FNDC10 LOC107985729 LOC148413
esv2760410 Chr.1:1565561 - 1756248 on Build GRCh38 Gain+Loss SSU72 MMP23A MIB2 SLC35E2 FNDC10 SLC35E2B CDK11A CDK11B MMP23B NADK
nsv545017 Chr.1:1615322 - 1663759 on Build GRCh38 Loss MIB2 SLC35E2B CDK11B MMP23B
esv2758913 Chr.1:1389149 - 2092899 on Build GRCh38 Gain+Loss TMEM240 SLC35E2 VWA1 ATAD3C CDK11A CDK11B CCNL2 LOC105378591 ATAD3A GABRD MIB2 MMP23A ANKRD65 MRPL20 LOC105378949 TMEM88B SLC35E2B ATAD3B MMP23B CFAP74 SSU72 PRKCZ CALML6 LOC102724312 TMEM52 FNDC10 LOC107985729 GNB1 LOC105378589 LOC148413 NADK

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More Information


Additional Information:

For this assay, SNP(s) [rs70937161] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s) Process(es)


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