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Gene Symbol
CHD1L
Assay Reference Genome
Location

Chr.1:147190374 on build GRCh38
Cytoband
1q21.1
Assay ID Hs03371589_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9557

Gene Name:

 chromodomain helicase DNA binding protein 1 like

Gene Aliases:

 ALC1, CHDL

Location:

 Chr.1:147172804-147295766 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHD1L XM_017002858.1 XP_016858347.1

Target Gene Details

Entrez Gene ID:

 2330

Gene Name:

 flavin containing monooxygenase 5

Gene Aliases:

 -

Location:

 Chr.1:147183963-147225798 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
FMO5 NM_001144829.2 NP_001138301.1
NM_001144830.2 NP_001138302.1
NM_001461.3 NP_001452.2
XM_005272946.4 XP_005273003.1
XM_005272947.4 XP_005273004.1
XM_005272948.4 XP_005273005.1
XM_006711245.3 XP_006711308.1
XM_011509350.2 XP_011507652.1
XM_011509351.2 XP_011507653.1
XM_017000801.1 XP_016856290.1
XM_017000802.1 XP_016856291.1
AK222728.1 BAD96448.1
AK225739.1
AK314647.1
BC035687.1 AAH35687.1
L37080.1 AAA67849.1
Z47553.1 CAA87633.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain NOTCH2NL NBPF14 NUDT4P2 MIR6077 PPIAL4G GJA8 RNVU1-8 LOC100132057 BCL9 PDE4DIP NBPF13P LOC105371226 RNU1-13P PDZK1P1 GJA5 LOC728989 RNVU1-6 NBPF12 LOC105371242 LOC101927468 ACP6 CHD1L LINC01138 LINC00624 LOC101928979 RNVU1-3 RNVU1-7 HYDIN2 PDIA3P1 NBPF10 GPR89B FMO5 LOC100996517 LOC100996763 PRKAB2 CH17-408M7.1 RNVU1-1 NUDT4P1 LOC100505824 MIR5087 NBPF11 LOC284561
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss NOTCH2NL NBPF14 NUDT4P2 PPIAL4G GJA8 RNVU1-8 LOC100132057 MIR6736 PDE4DIP NBPF13P RNU1-13P GJA5 HFE2 RNVU1-6 NBPF12 LOC101927468 POLR3GL PEX11B RNVU1-7 HYDIN2 GPR89A POLR3C TXNIP LOC284561 MIR6077 RNF115 BCL9 PIAS3 LOC105371226 PDZK1P1 LOC728989 CD160 LIX1L ANKRD34A LOC105371242 ACP6 CHD1L LINC01138 LINC00624 LOC101928979 RNVU1-3 RBM8A ITGA10 PDZK1 PDIA3P1 ANKRD35 NBPF10 GNRHR2 GPR89B FMO5 LOC100996517 LOC100996763 PRKAB2 CH17-408M7.1 RNVU1-1 NUDT4P1 LOC100505824 NUDT17 MIR5087 NBPF11
dgv67e199 Chr.1:147188956 - 147198583 on Build GRCh38 Deletion CHD1L FMO5
nsv1121713 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion LOC728989 CHD1L RNVU1-8 FMO5 PRKAB2 NBPF13P PDIA3P1
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss NOTCH2NL NBPF14 NUDT4P2 MIR6077 PPIAL4G GJA8 RNVU1-8 LOC100132057 BCL9 PDE4DIP NBPF13P LOC105371226 RNU1-13P PDZK1P1 GJA5 LOC728989 NBPF12 LOC105371242 LOC101927468 ACP6 CHD1L LINC01138 LINC00624 RNVU1-3 RNVU1-7 HYDIN2 PDIA3P1 NBPF10 GPR89B FMO5 LOC100996517 LOC100996763 PRKAB2 CH17-408M7.1 RNVU1-1 NUDT4P1 LOC100505824 MIR5087 NBPF11 LOC284561
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion NOTCH2NL NBPF14 NUDT4P2 MIR6077 PPIAL4G GJA8 RNVU1-8 LOC100132057 BCL9 PDE4DIP NBPF13P LOC105371226 RNU1-13P PDZK1P1 GJA5 LOC728989 LIX1L HFE2 ANKRD34A RNVU1-6 NBPF12 LOC105371242 LOC101927468 POLR3GL ACP6 CHD1L LINC01138 LINC00624 LOC101928979 RNVU1-3 RNVU1-7 HYDIN2 PDIA3P1 NBPF10 GPR89B FMO5 TXNIP LOC100996517 LOC100996763 PRKAB2 CH17-408M7.1 RNVU1-1 NUDT4P1 LOC100505824 MIR5087 NBPF11 LOC284561
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication NOTCH2NL NBPF14 NUDT4P2 MIR6077 PPIAL4G GJA8 RNVU1-8 LOC100132057 BCL9 PDE4DIP NBPF13P LOC105371226 RNU1-13P PDZK1P1 GJA5 LOC728989 NBPF12 LOC105371242 LOC101927468 ACP6 CHD1L LINC01138 LINC00624 RNVU1-3 RNVU1-7 HYDIN2 PDIA3P1 GPR89B FMO5 LOC100996517 LOC100996763 PRKAB2 CH17-408M7.1 RNVU1-1 NUDT4P1 LOC100505824 MIR5087 NBPF11 LOC284561
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain NOTCH2NL NBPF14 NUDT4P2 MIR6077 PPIAL4G GJA8 RNVU1-8 LOC100132057 BCL9 PDE4DIP NBPF13P LOC105371226 RNU1-13P PDZK1P1 GJA5 LOC728989 RNVU1-6 NBPF12 LOC105371242 LOC101927468 ACP6 CHD1L LINC01138 LINC00624 LOC101928979 RNVU1-3 RNVU1-7 HYDIN2 PDIA3P1 NBPF10 GPR89B FMO5 LOC100996517 LOC100996763 PRKAB2 CH17-408M7.1 RNVU1-1 NUDT4P1 LOC100505824 MIR5087 NBPF11 LOC284561
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion NOTCH2NL NBPF14 NUDT4P2 MIR6077 PPIAL4G GJA8 RNVU1-8 LOC100132057 BCL9 PDE4DIP NBPF13P LOC105371226 RNU1-13P PDZK1P1 GJA5 LOC728989 NBPF12 LOC105371242 NBPF9 LOC101927468 ACP6 CHD1L LINC01138 LINC00624 LOC101928979 RNVU1-3 RNVU1-7 HYDIN2 PDIA3P1 NBPF10 GPR89B FMO5 LOC100996517 LOC100996763 PRKAB2 CH17-408M7.1 RNVU1-1 NUDT4P1 LOC100505824 MIR5087 NBPF11 LOC284561
esv3587435 Chr.1:147189056 - 147198713 on Build GRCh38 Loss CHD1L FMO5
nsv437047 Chr.1:147171976 - 147369886 on Build GRCh38 Loss CHD1L FMO5 PRKAB2 PDIA3P1

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