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Gene Symbol
MEGF6
Assay Reference Genome
Location

Chr.1:3491406 on build GRCh38
Cytoband
1p36.32
Assay ID Hs03375204_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 1953

Gene Name:

 multiple EGF like domains 6

Gene Aliases:

 EGFL3

Location:

 Chr.1:3487942-3624757 on Build GRCh38

Assay Gene Location:

 Within Intron 39
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MEGF6 NM_001409.3 NP_001400.3
XM_006710406.3 XP_006710469.1
XM_011540885.1 XP_011539187.1
XM_011540886.1 XP_011539188.1
XM_011540887.2 XP_011539189.1
XM_017000533.1 XP_016856022.1
AB011539.2 BAA32467.2
AB231860.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2758915 Chr.1:3372374 - 3632289 on Build GRCh38 Gain TPRG1L WRAP73 ARHGEF16 MEGF6 PRDM16 MIR551A
nsv470687 Chr.1:3356499 - 3763210 on Build GRCh38 Loss TPRG1L WRAP73 ARHGEF16 TP73 CCDC27 TP73-AS1 MEGF6 PRDM16 MIR551A
nsv1012423 Chr.1:3477686 - 4747449 on Build GRCh38 Gain SMIM1 WRAP73 ARHGEF16 CEP104 LOC284661 TP73 LINC01134 LINC01346 MEGF6 LRRC47 C1orf174 TPRG1L AJAP1 CCDC27 TP73-AS1 DFFB MIR551A
nsv951959 Chr.1:3051037 - 3812036 on Build GRCh38 Deletion SMIM1 WRAP73 LOC105378604 ARHGEF16 TP73 LINC00982 MEGF6 LRRC47 PRDM16 TPRG1L CCDC27 TP73-AS1 MIR551A MIR4251
esv3893545 Chr.1:3460878 - 3512044 on Build GRCh38 Loss ARHGEF16 MEGF6
nsv545125 Chr.1:3490443 - 3540731 on Build GRCh38 Loss MEGF6
nsv830203 Chr.1:3446374 - 3607752 on Build GRCh38 Loss ARHGEF16 MEGF6 MIR551A
nsv299 Chr.1:3476928 - 3512705 on Build GRCh38 Insertion ARHGEF16 MEGF6

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More Information


Additional Information:

For this assay, SNP(s) [rs116356157] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

extracellular matrix protein

Gene Ontology Categories:

Function(s) Process(es)


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