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Gene Symbol
NOC2L
Assay Reference Genome
Location

Chr.1:946710 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03382801_cn
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Assay Details

Target Gene Details

Entrez Gene ID:

 26155

Gene Name:

 NOC2 like nucleolar associated transcriptional repressor

Gene Aliases:

 NET15, NET7, NIR, PPP1R112

Location:

 Chr.1:944203-959299 on Build GRCh38

Assay Gene Location:

 Within Intron 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NOC2L NM_015658.3 NP_056473.2
AK022756.1 BAB14230.1
AK024284.1
AK092491.1 1 351 BAC03905.1
AK225239.1
AK315080.1
AL050019.1 CAB43240.2
BC003555.1 AAH03555.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain ISG15 LOC100130417 PLEKHN1 SAMD11 PERM1 LOC100288175 KLHL17 LOC284600 C1orf159 NOC2L HES4 LOC107985728 LOC105378948 RNF223 AGRN
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss SKI LOC100130417 MIR6723 CCNL2 CPTP DDX11L1 LOC284600 SSU72 MIR6859-1 LOC105378591 B3GALT6 GABRD LOC107985728 CALML6 VWA1 LOC100287934 MIR6808 LOC102725121 LOC148413 LOC100129534 LOC729737 PERM1 LOC100506504 MMP23B FNDC10 OR4F16 TTLL10 NADK DVL1 TNFRSF4 LOC107984841 ATAD3B MIB2 MTND1P23 MIR6727 SLC35E2 NOC2L LOC100133331 FAM41C ANKRD65 ISG15 LOC102724312 LOC105378592 KLHL17 MIR6726 WASH7P LOC105378589 TTLL10-AS1 FAM87B FAAP20 CDK11A LOC100134822 CFAP74 TMEM88B MXRA8 LINC00115 LOC100288175 MIR429 MIR6859-2 SLC35E2B HES4 CPSF3L ATAD3A AGRN LINC01342 SDF4 ATAD3C SAMD11 UBE2J2 TMEM240 LOC107985729 LOC105378947 OR4F29 GNB1 LOC105378949 RNF223 PUSL1 MRPL20 MORN1 PRKCZ PLEKHN1 MIR200A FAM132A C1orf159 TMEM52 SCNN1D LOC100132287 MIR200B MMP23A TAS1R3 CDK11B FAM138A LOC101928626 OR4F5 AURKAIP1 LOC100288069 ACAP3 MIR1302-2 TNFRSF18 LOC105378948 MTND2P28 LINC01128
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion ISG15 LOC100130417 PLEKHN1 SAMD11 PERM1 LOC100288175 KLHL17 LOC284600 C1orf159 NOC2L HES4 LOC107985728 LOC105378948 RNF223 AGRN
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion LOC284600 NOC2L LOC100130417 PLEKHN1 LOC107985728 SAMD11 PERM1 KLHL17
dgv9n54 Chr.1:925754 - 952840 on Build GRCh38 Loss NOC2L SAMD11
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain TNFRSF4 LOC100130417 PLEKHN1 MIR200A LOC100288175 LOC284600 C1orf159 NOC2L MIR429 MIR200B HES4 LOC107985728 AGRN FAM41C LINC01342 SDF4 ISG15 SAMD11 PERM1 KLHL17 TNFRSF18 TTLL10-AS1 TTLL10 LOC105378948 RNF223
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC100130417 CCNL2 TMEM88B MXRA8 CPTP LINC00115 LOC100288175 LOC284600 SSU72 MIR429 B3GALT6 SLC35E2B HES4 LOC107985728 CPSF3L ATAD3A VWA1 AGRN LOC100287934 MIR6808 LINC01342 SDF4 ATAD3C SAMD11 LOC148413 PERM1 MMP23B FNDC10 UBE2J2 TMEM240 TTLL10 LOC107985729 RNF223 NADK DVL1 PUSL1 MRPL20 TNFRSF4 ATAD3B MIB2 PLEKHN1 MIR200A FAM132A MIR6727 C1orf159 SLC35E2 NOC2L SCNN1D MIR200B MMP23A TAS1R3 CDK11B FAM41C ANKRD65 ISG15 LOC102724312 AURKAIP1 LOC100288069 ACAP3 KLHL17 MIR6726 TNFRSF18 TTLL10-AS1 FAM87B LOC105378948 CDK11A LINC01128
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain LOC107984841 LOC100130417 PLEKHN1 MIR6723 MTND1P23 LINC00115 LOC100288175 LOC284600 C1orf159 NOC2L LOC100133331 HES4 LOC107985728 AGRN LOC100287934 LOC101928626 FAM41C ISG15 SAMD11 LOC100288069 PERM1 KLHL17 OR4F16 FAM87B LOC105378948 LOC105378947 RNF223 MTND2P28 LINC01128
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss TNFRSF4 LOC100130417 PLEKHN1 MIR200A FAM132A LINC00115 LOC100288175 LOC284600 C1orf159 NOC2L MIR429 B3GALT6 MIR200B HES4 LOC107985728 AGRN FAM41C LINC01342 SDF4 ISG15 SAMD11 PERM1 KLHL17 TNFRSF18 UBE2J2 TTLL10-AS1 FAM87B TTLL10 LOC105378948 RNF223 LINC01128
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain LINC01342 ISG15 PLEKHN1 SAMD11 PERM1 LOC100288175 KLHL17 C1orf159 NOC2L HES4 LOC105378948 RNF223 AGRN
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion TNFRSF4 LINC01342 SDF4 ISG15 PLEKHN1 SAMD11 MIR200A PERM1 LOC100288175 KLHL17 C1orf159 NOC2L MIR429 TNFRSF18 MIR200B HES4 TTLL10-AS1 TTLL10 LOC105378948 RNF223 AGRN
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss LOC284600 NOC2L ISG15 LOC100130417 PLEKHN1 HES4 LOC107985728 SAMD11 AGRN PERM1 KLHL17
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MRPL20 TNFRSF4 LOC100130417 PLEKHN1 CCNL2 MIR200A TMEM88B MXRA8 FAM132A CPTP LOC100288175 MIR6727 LOC284600 C1orf159 NOC2L MIR429 B3GALT6 SCNN1D MIR200B TAS1R3 HES4 LOC107985728 CPSF3L AGRN MIR6808 ANKRD65 LINC01342 SDF4 ISG15 SAMD11 LOC148413 AURKAIP1 PERM1 ACAP3 KLHL17 MIR6726 TNFRSF18 UBE2J2 TTLL10-AS1 TTLL10 LOC105378948 RNF223 DVL1 PUSL1
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain LOC284600 FAM41C NOC2L LOC100130417 PLEKHN1 HES4 LOC107985728 SAMD11 PERM1 LINC01128 KLHL17

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