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Gene Symbol
SAMD11
Assay Reference Genome
Location

Chr.1:941694 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03384965_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 148398

Gene Name:

 sterile alpha motif domain containing 11

Gene Aliases:

 MRS

Location:

 Chr.1:925741-944581 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAMD11 NM_152486.2 NP_689699.2
AK054643.1 BAB70781.1
BC024295.2 AAH24295.1
BC033213.1 AAH33213.1
JX093066.1
JX093067.1
JX093068.1
JX093069.1
JX093070.1
JX093071.1
JX093072.1
JX093073.1
JX093074.1
JX093075.1
JX093076.1
JX093077.1
JX093078.1
JX093079.1
JX093080.1
JX093081.1
JX093082.1
JX093083.1
JX093084.1
JX093085.1
JX093086.1
JX093087.1
JX093088.1
JX093089.1
JX093090.1
JX093091.1
JX093092.1
JX093093.1
JX093094.1
JX093095.1
JX093096.1
JX093097.1
JX093098.1
JX093099.1
JX093100.1
JX093101.1
JX093102.1
JX093103.1
JX093104.1
JX093105.1
JX093106.1
JX093107.1
JX093108.1
JX093109.1
JX093110.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv15n54 Chr.1:934063 - 943937 on Build GRCh38 Loss SAMD11
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain AGRN ISG15 PERM1 C1orf159 LOC100288175 PLEKHN1 RNF223 HES4 LOC105378948 LOC100130417 LOC284600 KLHL17 NOC2L LOC107985728 SAMD11
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss C1orf159 OR4F29 MIR6859-2 LOC105378948 MIR6808 B3GALT6 LOC100134822 CDK11A MORN1 LOC100133331 GABRD PLEKHN1 LINC00115 RNF223 MIR6859-1 SLC35E2 LOC102725121 MIR1302-2 LOC284600 OR4F5 CPSF3L LOC102724312 LOC101928626 LOC100288069 PERM1 TMEM52 MTND1P23 LOC148413 NADK UBE2J2 CCNL2 SAMD11 MMP23A FAM138A DDX11L1 PUSL1 TNFRSF18 LOC107984841 SSU72 CPTP KLHL17 NOC2L LOC107985728 MIR429 LOC105378949 LOC100287934 WASH7P CALML6 MIR6726 SDF4 SKI LOC107985729 LOC105378592 LOC105378591 FAM41C LOC105378589 LOC100506504 TTLL10-AS1 MMP23B PRKCZ LINC01342 HES4 MXRA8 MIR200A MRPL20 ATAD3A LOC100129534 TMEM88B AURKAIP1 AGRN ISG15 LOC100132287 LINC01128 ANKRD65 SLC35E2B LOC100288175 TMEM240 ACAP3 FNDC10 MIR200B VWA1 TTLL10 LOC729737 TNFRSF4 CFAP74 FAM87B FAAP20 DVL1 MIR6727 MTND2P28 CDK11B SCNN1D MIB2 MIR6723 LOC100130417 ATAD3C OR4F16 ATAD3B GNB1 FAM132A LOC105378947 TAS1R3
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion AGRN ISG15 PERM1 C1orf159 LOC100288175 PLEKHN1 RNF223 HES4 LOC105378948 LOC100130417 LOC284600 KLHL17 NOC2L LOC107985728 SAMD11
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion LOC100130417 PERM1 LOC284600 PLEKHN1 KLHL17 NOC2L LOC107985728 SAMD11
dgv9n54 Chr.1:925754 - 952840 on Build GRCh38 Loss NOC2L SAMD11
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain AGRN ISG15 PERM1 C1orf159 LOC100288175 SDF4 LOC105378948 MIR200B FAM41C TTLL10 TNFRSF4 SAMD11 TTLL10-AS1 PLEKHN1 LINC01342 RNF223 HES4 TNFRSF18 MIR200A LOC100130417 LOC284600 KLHL17 NOC2L LOC107985728 MIR429
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC100287934 C1orf159 MIR6726 SDF4 LOC107985729 LOC105378948 MIR6808 FAM41C B3GALT6 CDK11A TTLL10-AS1 MMP23B PLEKHN1 LINC00115 LINC01342 RNF223 HES4 MXRA8 MIR200A MRPL20 SLC35E2 LOC284600 ATAD3A CPSF3L TMEM88B LOC102724312 AURKAIP1 AGRN ISG15 LOC100288069 LINC01128 ANKRD65 PERM1 SLC35E2B LOC100288175 TMEM240 LOC148413 ACAP3 NADK FNDC10 UBE2J2 MIR200B CCNL2 VWA1 TTLL10 TNFRSF4 SAMD11 MMP23A FAM87B DVL1 MIR6727 PUSL1 TNFRSF18 SSU72 CDK11B SCNN1D MIB2 CPTP LOC100130417 ATAD3C ATAD3B FAM132A KLHL17 NOC2L LOC107985728 MIR429 TAS1R3
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain AGRN LOC100287934 ISG15 LOC100288069 LINC01128 PERM1 C1orf159 LOC100288175 LOC105378948 MTND1P23 FAM41C SAMD11 FAM87B LOC100133331 PLEKHN1 LINC00115 RNF223 HES4 LOC107984841 MTND2P28 MIR6723 LOC100130417 OR4F16 LOC284600 KLHL17 NOC2L LOC105378947 LOC107985728 LOC101928626
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss AGRN ISG15 LINC01128 PERM1 C1orf159 LOC100288175 SDF4 LOC105378948 UBE2J2 MIR200B FAM41C B3GALT6 TTLL10 TNFRSF4 SAMD11 TTLL10-AS1 FAM87B PLEKHN1 LINC00115 LINC01342 RNF223 HES4 TNFRSF18 MIR200A LOC100130417 LOC284600 FAM132A KLHL17 NOC2L LOC107985728 MIR429
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain AGRN ISG15 PERM1 C1orf159 LOC100288175 PLEKHN1 LINC01342 RNF223 HES4 LOC105378948 KLHL17 NOC2L SAMD11
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion AGRN ISG15 TTLL10-AS1 PERM1 C1orf159 LOC100288175 PLEKHN1 LINC01342 RNF223 HES4 TNFRSF18 SDF4 MIR200A LOC105378948 MIR200B KLHL17 NOC2L TTLL10 TNFRSF4 MIR429 SAMD11
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss AGRN ISG15 LOC100130417 PERM1 LOC284600 PLEKHN1 KLHL17 NOC2L HES4 LOC107985728 SAMD11
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain AGRN ISG15 ANKRD65 PERM1 C1orf159 LOC100288175 MIR6726 SDF4 LOC105378948 LOC148413 ACAP3 UBE2J2 MIR6808 MIR200B CCNL2 B3GALT6 TTLL10 TNFRSF4 SAMD11 TTLL10-AS1 PLEKHN1 DVL1 LINC01342 MIR6727 RNF223 HES4 MXRA8 PUSL1 TNFRSF18 MIR200A MRPL20 SCNN1D CPTP LOC100130417 LOC284600 FAM132A KLHL17 NOC2L LOC107985728 CPSF3L TMEM88B MIR429 TAS1R3 AURKAIP1
nsv544898 Chr.1:924665 - 943937 on Build GRCh38 Gain LOC107985728 SAMD11
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain LOC100130417 LINC01128 PERM1 LOC284600 PLEKHN1 KLHL17 FAM41C NOC2L HES4 LOC107985728 SAMD11

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:


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