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Gene Symbol
SAMD11
Assay Reference Genome
Location

Chr.1:941694 on build GRCh38
Cytoband
1p36.33
Assay ID Hs03384965_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 148398

Gene Name:

 sterile alpha motif domain containing 11

Gene Aliases:

 MRS

Location:

 Chr.1:925741-944581 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAMD11 NM_152486.2 NP_689699.2
AK054643.1 BAB70781.1
BC024295.2 AAH24295.1
BC033213.1 AAH33213.1
JX093066.1
JX093067.1
JX093068.1
JX093069.1
JX093070.1
JX093071.1
JX093072.1
JX093073.1
JX093074.1
JX093075.1
JX093076.1
JX093077.1
JX093078.1
JX093079.1
JX093080.1
JX093081.1
JX093082.1
JX093083.1
JX093084.1
JX093085.1
JX093086.1
JX093087.1
JX093088.1
JX093089.1
JX093090.1
JX093091.1
JX093092.1
JX093093.1
JX093094.1
JX093095.1
JX093096.1
JX093097.1
JX093098.1
JX093099.1
JX093100.1
JX093101.1
JX093102.1
JX093103.1
JX093104.1
JX093105.1
JX093106.1
JX093107.1
JX093108.1
JX093109.1
JX093110.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv15n54 Chr.1:934063 - 943937 on Build GRCh38 Loss SAMD11
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain LOC105378948 LOC100288175 LOC284600 LOC107985728 HES4 PERM1 KLHL17 RNF223 SAMD11 LOC100130417 C1orf159 AGRN PLEKHN1 ISG15 NOC2L
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss SDF4 LOC100288069 LOC100288175 LOC101928626 LOC100506504 SCNN1D SKI LOC107984841 LOC100130417 LOC148413 DDX11L1 LOC105378591 TNFRSF4 MIB2 FAAP20 ISG15 CCNL2 CALML6 TTLL10 MTND1P23 PERM1 SAMD11 ATAD3C LOC100129534 LOC102725121 TNFRSF18 TAS1R3 LOC100133331 LOC105378949 PLEKHN1 NADK CDK11A CPSF3L MIR6859-2 LOC105378948 LOC100132287 GNB1 WASH7P HES4 RNF223 ATAD3B LOC105378589 MIR429 LINC00115 SSU72 LOC105378592 MIR6808 ACAP3 LOC107985728 LOC100134822 TMEM240 B3GALT6 OR4F16 MTND2P28 FAM41C MMP23A LOC100287934 MIR6727 MIR6726 FAM132A FNDC10 ANKRD65 PUSL1 KLHL17 TTLL10-AS1 MIR6723 TMEM52 GABRD C1orf159 NOC2L ATAD3A VWA1 MIR200B UBE2J2 TMEM88B MORN1 MIR200A DVL1 FAM87B PRKCZ LOC102724312 MRPL20 LINC01342 CDK11B SLC35E2 OR4F5 MIR6859-1 AGRN MMP23B AURKAIP1 LOC284600 LOC105378947 LOC107985729 LOC729737 OR4F29 LINC01128 CPTP SLC35E2B FAM138A MIR1302-2 MXRA8 CFAP74
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion LOC105378948 LOC100288175 LOC284600 LOC107985728 HES4 PERM1 KLHL17 RNF223 SAMD11 LOC100130417 C1orf159 AGRN PLEKHN1 ISG15 NOC2L
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion LOC284600 LOC107985728 PLEKHN1 PERM1 NOC2L KLHL17 SAMD11 LOC100130417
dgv8n54 Chr.1:925754 - 943937 on Build GRCh38 Loss SAMD11
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain LOC105378948 SDF4 LOC100288175 HES4 KLHL17 RNF223 LOC100130417 TTLL10-AS1 LINC01342 TNFRSF4 MIR429 C1orf159 AGRN ISG15 NOC2L TTLL10 MIR200B LOC284600 LOC107985728 PERM1 SAMD11 FAM41C TNFRSF18 MIR200A PLEKHN1
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain LOC100287934 LOC105378948 LOC100288069 LOC100288175 LOC101928626 LOC107984841 HES4 KLHL17 RNF223 LOC100130417 MIR6723 C1orf159 AGRN LINC00115 ISG15 NOC2L MTND1P23 LOC284600 LOC105378947 LOC107985728 PERM1 SAMD11 OR4F16 MTND2P28 LINC01128 FAM41C LOC100133331 PLEKHN1 FAM87B
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC100287934 SDF4 LOC100288069 LOC100288175 MIR6727 MIR6726 FAM132A FNDC10 SCNN1D ANKRD65 PUSL1 KLHL17 LOC100130417 TTLL10-AS1 LOC148413 TNFRSF4 MIB2 C1orf159 ISG15 NOC2L ATAD3A CCNL2 VWA1 TTLL10 MIR200B UBE2J2 PERM1 TMEM88B SAMD11 ATAD3C TNFRSF18 TAS1R3 MIR200A PLEKHN1 DVL1 NADK CDK11A CPSF3L FAM87B LOC105378948 LOC102724312 HES4 MRPL20 RNF223 LINC01342 ATAD3B CDK11B SLC35E2 MIR429 AGRN MMP23B LINC00115 SSU72 AURKAIP1 MIR6808 LOC284600 ACAP3 LOC107985728 TMEM240 B3GALT6 LOC107985729 LINC01128 FAM41C CPTP SLC35E2B MMP23A MXRA8
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss LOC105378948 SDF4 LOC100288175 FAM132A HES4 KLHL17 RNF223 LOC100130417 TTLL10-AS1 LINC01342 TNFRSF4 MIR429 C1orf159 AGRN LINC00115 ISG15 NOC2L TTLL10 MIR200B UBE2J2 LOC284600 LOC107985728 B3GALT6 PERM1 SAMD11 LINC01128 FAM41C TNFRSF18 MIR200A PLEKHN1 FAM87B
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain LOC105378948 LOC100288175 HES4 PERM1 KLHL17 RNF223 SAMD11 LINC01342 C1orf159 AGRN PLEKHN1 ISG15 NOC2L
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain LOC105378948 SDF4 LOC100288175 MIR6727 MIR6726 FAM132A SCNN1D ANKRD65 PUSL1 HES4 MRPL20 KLHL17 RNF223 LOC100130417 TTLL10-AS1 LINC01342 LOC148413 TNFRSF4 MIR429 C1orf159 AGRN ISG15 NOC2L CCNL2 TTLL10 AURKAIP1 MIR200B UBE2J2 MIR6808 LOC284600 ACAP3 LOC107985728 B3GALT6 PERM1 TMEM88B SAMD11 CPTP TNFRSF18 TAS1R3 MXRA8 MIR200A PLEKHN1 DVL1 CPSF3L
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss LOC284600 AGRN LOC107985728 HES4 PLEKHN1 PERM1 ISG15 NOC2L KLHL17 SAMD11 LOC100130417
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion TTLL10 MIR200B LOC105378948 SDF4 LOC100288175 HES4 PERM1 KLHL17 RNF223 SAMD11 TTLL10-AS1 LINC01342 TNFRSF4 TNFRSF18 MIR429 C1orf159 AGRN MIR200A PLEKHN1 ISG15 NOC2L
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain FAM41C LOC284600 LOC107985728 HES4 PLEKHN1 PERM1 NOC2L KLHL17 SAMD11 LOC100130417 LINC01128
nsv544898 Chr.1:924665 - 943937 on Build GRCh38 Gain LOC107985728 SAMD11

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:


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