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See other DHFR CNV Assays ›
Gene Symbol
DHFR
Assay Reference Genome
Location

Chr.5:80631758 on build GRCh38
Cytoband
5q14.1
Assay ID Hs03549674_cn
Size
Availability Made To Order
Catalog # 4400291
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  • Genomic Map
  • Assay Details
  • More Information

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:

1719

Gene Name:

dihydrofolate reductase

Gene Aliases:

DHFRP1, DYR

Location:

Chr.5:80626226-80654981 on Build GRCh38

Assay Gene Location:

Within Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DHFR NM_000791.3 NP_000782.1
NM_001290354.1 NP_001277283.1
NM_001290357.1 NP_001277286.1
NR_110936.1
AK293146.1
AK297302.1
AK308492.1
BC000192.1 AAH00192.1
BC003584.1 AAH03584.2
BC070280.1 AAH70280.1
BC071996.1 AAH71996.1
J00140.1 AAA58485.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38
Target
Variation
Location CNV
Subtype
Genes
nsv483112 Chr.5:80551019 - 80731514 on Build GRCh38 Loss ANKRD34B DHFR LINC01337 MTRNR2L2 MSH3
nsv4895 Chr.5:80623591 - 80640149 on Build GRCh38 Insertion DHFR

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More Information


Additional Information:

For this assay, SNP(s) [rs202167641] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

reductase

Gene Ontology Categories:

Function(s) Process(es)

G1/S transition of mitotic cell cycle
regulation of transcription involved in G1/S transition of mitotic cell cycle
glycine biosynthetic process
tetrahydrobiopterin biosynthetic process
one-carbon metabolic process
nucleotide biosynthetic process
axon regeneration
response to methotrexate
dihydrofolate metabolic process
tetrahydrofolate metabolic process
tetrahydrofolate biosynthetic process
folic acid metabolic process
positive regulation of nitric-oxide synthase activity
oxidation-reduction process
regulation of removal of superoxide radicals
mRNA binding
dihydrofolate reductase activity
folic acid binding
drug binding
folate reductase activity
methotrexate binding
NADPH binding

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