Hs03971920_cn

• Gene Symbol: CD300C
• Assay Reference Genome Location: Chr.17:74544237 on build GRCh38
• Cytoband: 17q25.1

Target Gene Details

• Entrez Gene ID: 10871
• Gene Name: CD300c molecule
• Gene Aliases: CLM-6, CMRF-35, CMRF-35A, CMRF35, CMRF35-A1, CMRF35A, CMRF35A1, IGSF16, LIR
• Location: Chr.17:74534359-74546171 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CD300C	NM_006678.4			NP_006669.1
	XM_017024033.1			XP_016879522.1
	XM_017024034.1			XP_016879523.1
	BC022279.1			AAH22279.1
	X66171.1			CAA46948.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv12e196	Chr.17:73675043 - 74565539 on Build GRCh38	Duplication	CD300LB MGC16275 GPRC5C CD300A RPL38 CD300C KIF19 TTYH2 DNAI2 GPR142 LOC400620 LOC100134391 LOC100130520 BTBD17 LINC00469
nsv470600	Chr.17:74466882 - 74550979 on Build GRCh38	Loss	CD300LB CD300A CD300C
esv2761978	Chr.17:73835799 - 74684915 on Build GRCh38	Gain	CD300LB MGC16275 GPRC5C CD300A RPL38 CD300C KIF19 CD300LD TTYH2 DNAI2 C17orf77 RAB37 GPR142 CD300E LOC101928343 LOC100130520 BTBD17
esv3641230	Chr.17:73831787 - 74694861 on Build GRCh38	Gain	CD300LB MGC16275 GPRC5C CD300A RPL38 CD300C KIF19 CD300LF CD300LD TTYH2 DNAI2 C17orf77 RAB37 GPR142 CD300E LOC101928343 LOC100130520 BTBD17
dgv3282n100	Chr.17:73814343 - 74719597 on Build GRCh38	Gain	CD300LB MGC16275 GPRC5C CD300A RPL38 CD300C KIF19 CD300LF CD300LD TTYH2 DNAI2 C17orf77 RAB37 GPR142 CD300E LOC101928343 LOC100130520 BTBD17 LINC00469
esv33995	Chr.17:74261053 - 74732093 on Build GRCh38	Loss	CD300LB GPRC5C CD300A CD300C KIF19 CD300LF CD300LD TTYH2 DNAI2 C17orf77 RAB37 GPR142 CD300E LOC101928343 LOC100130520 BTBD17
nsv517569	Chr.17:73837862 - 74685802 on Build GRCh38	Gain+Loss	CD300LB MGC16275 GPRC5C CD300A RPL38 CD300C KIF19 CD300LD TTYH2 DNAI2 C17orf77 RAB37 GPR142 CD300E LOC101928343 LOC100130520 BTBD17
dgv5768n54	Chr.17:73826016 - 74706775 on Build GRCh38	Gain	CD300LB MGC16275 GPRC5C CD300A RPL38 CD300C KIF19 CD300LF CD300LD TTYH2 DNAI2 C17orf77 RAB37 GPR142 CD300E LOC101928343 LOC100130520 BTBD17 LINC00469
esv3573820	Chr.17:73817932 - 74694378 on Build GRCh38	Gain	CD300LB MGC16275 GPRC5C CD300A RPL38 CD300C KIF19 CD300LF CD300LD TTYH2 DNAI2 C17orf77 RAB37 GPR142 CD300E LOC101928343 LOC100130520 BTBD17 LINC00469
esv3641244	Chr.17:74527395 - 74686883 on Build GRCh38	Gain	CD300LB CD300LD C17orf77 RAB37 CD300E CD300C LOC101928343 LOC100130520
dgv5774n54	Chr.17:74428381 - 74673021 on Build GRCh38	Gain	CD300LB CD300LD GPRC5C CD300A C17orf77 RAB37 CD300E CD300C LOC101928343 LOC100130520

More Information

Additional Information:

For this assay, SNP(s) [rs146645561] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

immunoglobulin receptor superfamily

Gene Ontology Categories:

Process(es)

immune system process
cellular defense response
signal transduction
regulation of immune response

Function(s)

transmembrane signaling receptor activity