Hs04195763_cn

• Gene Symbol: SLC35E2B
• Assay Reference Genome Location: Chr.1:1685744 on build GRCh38
• Cytoband: 1p36.33

Target Gene Details

• Entrez Gene ID: 728661
• Gene Name: solute carrier family 35 member E2B
• Gene Aliases: SLC35E2
• Location: Chr.1:1661478-1692804 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC35E2B	NM_001110781.2			NP_001104251.1
	NM_001290264.1			NP_001277193.1
	XM_011542072.1			XP_011540374.1
	AB007916.3
	AK125619.1
	AK307886.1
	BC110653.1			AAI10654.1
	BG328537.1
	CR936618.1			CAI56761.1
	DA794179.1
	DB450858.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv37n54	Chr.1:1663759 - 1696548 on Build GRCh38	Loss	SLC35E2B
dgv5n111	Chr.1:1575421 - 1823403 on Build GRCh38	Deletion	MIB2 SLC35E2 MMP23B CDK11A MMP23A CDK11B GNB1 FNDC10 SLC35E2B NADK
dgv8n100	Chr.1:1569349 - 1741152 on Build GRCh38	Loss	MIB2 SLC35E2 MMP23B CDK11A MMP23A SSU72 CDK11B FNDC10 SLC35E2B
esv3575582	Chr.1:1624086 - 1721336 on Build GRCh38	Gain	MIB2 MMP23B CDK11A MMP23A CDK11B SLC35E2B
esv3585010	Chr.1:1670280 - 1751138 on Build GRCh38	Loss	SLC35E2 CDK11A MMP23A SLC35E2B
nsv482937	Chr.1:10001 - 2368561 on Build GRCh38	Loss	DVL1 B3GALT6 CCNL2 OR4F16 MXRA8 SLC35E2 CPSF3L LOC107985728 CALML6 KLHL17 ATAD3B LOC100287934 OR4F5 LOC105378591 SKI MTND1P23 MMP23B SAMD11 WASH7P MRPL20 MIR200B PLEKHN1 MIR6723 MIR6859-2 GNB1 LOC105378949 C1orf159 ATAD3A SDF4 LINC01342 ANKRD65 OR4F29 NOC2L LOC100134822 MIR200A TNFRSF18 AURKAIP1 UBE2J2 LOC105378592 PUSL1 MIB2 LOC105378947 MIR6808 MIR6726 PRKCZ MIR1302-2 CDK11B ISG15 RNF223 FAM138A LINC01128 GABRD ATAD3C SSU72 ACAP3 TTLL10-AS1 LOC100129534 TMEM88B TMEM52 TAS1R3 MTND2P28 TTLL10 CFAP74 CDK11A LOC101928626 FNDC10 LOC100133331 VWA1 LOC729737 TMEM240 TNFRSF4 AGRN FAM41C LOC100506504 LOC105378948 FAAP20 LOC107985729 SLC35E2B MIR429 LOC102724312 FAM132A SCNN1D LINC00115 LOC100288069 CPTP DDX11L1 PERM1 MIR6859-1 MMP23A LOC100288175 MORN1 LOC107984841 LOC284600 FAM87B LOC100130417 HES4 LOC105378589 LOC102725121 LOC100132287 NADK LOC148413 MIR6727
nsv1160797	Chr.1:1566216 - 1805918 on Build GRCh38	Duplication	MIB2 SLC35E2 MMP23B CDK11A MMP23A SSU72 CDK11B GNB1 FNDC10 SLC35E2B NADK
dgv2e199	Chr.1:1653096 - 1721890 on Build GRCh38	Deletion	CDK11A MMP23A CDK11B SLC35E2B
esv2760410	Chr.1:1565561 - 1756248 on Build GRCh38	Gain+Loss	MIB2 SLC35E2 MMP23B CDK11A MMP23A SSU72 CDK11B FNDC10 SLC35E2B NADK
esv3585007	Chr.1:1647187 - 1714507 on Build GRCh38	Loss	CDK11A MMP23A CDK11B SLC35E2B
nsv950516	Chr.1:1663141 - 1715961 on Build GRCh38	Deletion	CDK11A MMP23A SLC35E2B
esv27786	Chr.1:1632502 - 1752267 on Build GRCh38	Gain	SLC35E2 MMP23B CDK11A MMP23A CDK11B SLC35E2B NADK
nsv10161	Chr.1:776731 - 1777210 on Build GRCh38	Gain+Loss	RNF223 DVL1 B3GALT6 LINC01128 CCNL2 ATAD3C SSU72 ACAP3 TTLL10-AS1 MXRA8 SLC35E2 TMEM88B CPSF3L TAS1R3 LOC107985728 TTLL10 KLHL17 ATAD3B CDK11A FNDC10 VWA1 TMEM240 LOC100287934 TNFRSF4 AGRN MMP23B FAM41C SAMD11 LOC105378948 MRPL20 MIR200B PLEKHN1 LOC107985729 SLC35E2B MIR429 LOC102724312 C1orf159 ATAD3A SDF4 FAM132A SCNN1D LINC00115 LINC01342 LOC100288069 CPTP ANKRD65 NOC2L MIR200A PERM1 TNFRSF18 AURKAIP1 MMP23A UBE2J2 LOC100288175 PUSL1 MIB2 MIR6808 LOC284600 FAM87B LOC100130417 HES4 MIR6726 CDK11B NADK LOC148413 ISG15 MIR6727
nsv545026	Chr.1:1671348 - 1706566 on Build GRCh38	Loss	CDK11A MMP23A SLC35E2B
nsv545018	Chr.1:1638499 - 1688102 on Build GRCh38	Loss	CDK11B SLC35E2B
dgv3n67	Chr.1:1653920 - 1735718 on Build GRCh38	Gain	SLC35E2 CDK11A MMP23A CDK11B SLC35E2B
esv2758913	Chr.1:1389149 - 2092899 on Build GRCh38	Gain+Loss	ATAD3A GABRD CCNL2 ATAD3C SSU72 ANKRD65 SLC35E2 TMEM88B TMEM52 CFAP74 CALML6 ATAD3B CDK11A MMP23A FNDC10 VWA1 TMEM240 MIB2 LOC105378591 MMP23B PRKCZ LOC105378589 MRPL20 CDK11B GNB1 LOC107985729 SLC35E2B LOC105378949 NADK LOC148413 LOC102724312
esv3577686	Chr.1:1685551 - 1721336 on Build GRCh38	Loss	CDK11A MMP23A SLC35E2B

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

secondary carrier transporter